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annotate m-toolbox/m/built_in_models/ao/ao_model_padded_sine.m @ 49:0bcdf74587d1 database-connection-manager

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Cleanup
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:24:36 +0100
parents f0afece42f48
children
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Daniele Nicolodi <nicolodi@science.unitn.it>
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1 % A built-in model of class ao called padded_sine
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Daniele Nicolodi <nicolodi@science.unitn.it>
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2 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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3 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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4 % DESCRIPTION: A built-in model of class ao called padded_sine
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Daniele Nicolodi <nicolodi@science.unitn.it>
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5 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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6 % CALL:
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Daniele Nicolodi <nicolodi@science.unitn.it>
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7 % mdl = ao(plist('built-in', 'padded_sine'));
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8 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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9 % INPUTS:
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Daniele Nicolodi <nicolodi@science.unitn.it>
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10 %
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11 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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12 % OUTPUTS:
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13 % mdl - an object of class ao
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14 %
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15 %
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16 % INFO:
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Daniele Nicolodi <nicolodi@science.unitn.it>
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17 % <a href="matlab:utils.models.displayModelOverview('ao_model_padded_sine')">Model Information</a>
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18 %
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19 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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20 % REFERENCES:
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21 %
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22 %
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23 % VERSION: $Id: ao_model_padded_sine.m,v 1.2 2011/04/29 08:19:44 hewitson Exp $
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24 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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25 % HISTORY:
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Daniele Nicolodi <nicolodi@science.unitn.it>
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26 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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27 %
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28 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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29
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Daniele Nicolodi <nicolodi@science.unitn.it>
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30 % YOU SHOULD NOT NEED TO EDIT THIS MAIN FUNCTION
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Daniele Nicolodi <nicolodi@science.unitn.it>
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31 function varargout = ao_model_padded_sine(varargin)
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32
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33 varargout = utils.models.mainFnc(varargin(:), ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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34 mfilename, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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35 @getModelDescription, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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36 @getModelDocumentation, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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37 @getVersion, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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38 @versionTable);
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39
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Daniele Nicolodi <nicolodi@science.unitn.it>
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40 end
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41
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42
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Daniele Nicolodi <nicolodi@science.unitn.it>
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43 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
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44 % AUTHORS EDIT THIS PART
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Daniele Nicolodi <nicolodi@science.unitn.it>
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45 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
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46
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Daniele Nicolodi <nicolodi@science.unitn.it>
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47 function desc = getModelDescription
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Daniele Nicolodi <nicolodi@science.unitn.it>
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48 desc = 'A built-in model that constructs a sine-wave time-series with zero-padding at each end.';
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Daniele Nicolodi <nicolodi@science.unitn.it>
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49 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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50
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Daniele Nicolodi <nicolodi@science.unitn.it>
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51 function doc = getModelDocumentation
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Daniele Nicolodi <nicolodi@science.unitn.it>
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52 doc = sprintf([...
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53 'A sine-wave time-series padded with zeros at both ends.\n'...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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54 ]);
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55 end
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56
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Daniele Nicolodi <nicolodi@science.unitn.it>
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57 % default version is always the first one
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Daniele Nicolodi <nicolodi@science.unitn.it>
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58 function vt = versionTable()
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59
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60 vt = {...
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61 'Version 1', @version1, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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62 };
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63
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64 end
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65
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66 % This version is ...
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67 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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68 function varargout = version1(varargin)
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69
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Daniele Nicolodi <nicolodi@science.unitn.it>
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70 if nargin == 1 && ischar(varargin{1})
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Daniele Nicolodi <nicolodi@science.unitn.it>
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71 switch varargin{1}
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Daniele Nicolodi <nicolodi@science.unitn.it>
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72 case 'plist'
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73
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Daniele Nicolodi <nicolodi@science.unitn.it>
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74 % The plist for this version of this model
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Daniele Nicolodi <nicolodi@science.unitn.it>
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75 pl = plist();
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Daniele Nicolodi <nicolodi@science.unitn.it>
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76
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Daniele Nicolodi <nicolodi@science.unitn.it>
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77 % A
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Daniele Nicolodi <nicolodi@science.unitn.it>
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78 p = param({'A', ['The amplitude of the sine-wave.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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79 paramValue.DOUBLE_VALUE(1));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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80 pl.append(p);
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81
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82 % f0
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83 p = param({'f0', ['The frequency of the sine-wave in Hz.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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84 paramValue.DOUBLE_VALUE(1));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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85 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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86
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Daniele Nicolodi <nicolodi@science.unitn.it>
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87 % phi
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Daniele Nicolodi <nicolodi@science.unitn.it>
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88 p = param({'phi', ['The phase of the sine-wave [deg].']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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89 paramValue.DOUBLE_VALUE(0));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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90 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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91
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Daniele Nicolodi <nicolodi@science.unitn.it>
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92 % dc
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Daniele Nicolodi <nicolodi@science.unitn.it>
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93 p = param({'dc', ['The dc offset of the sine-wave.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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94 paramValue.DOUBLE_VALUE(0));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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95 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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96
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Daniele Nicolodi <nicolodi@science.unitn.it>
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97 % t0
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Daniele Nicolodi <nicolodi@science.unitn.it>
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98 p = param({'Tstart', ['The start time offset of the sine-wave.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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99 paramValue.DOUBLE_VALUE(0));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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100 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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101
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Daniele Nicolodi <nicolodi@science.unitn.it>
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102 % N
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Daniele Nicolodi <nicolodi@science.unitn.it>
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103 p = param({'Ncycles', ['The number of cycles of the sine-wave. Can be fractional.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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104 paramValue.DOUBLE_VALUE(1));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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105 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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106
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Daniele Nicolodi <nicolodi@science.unitn.it>
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107 % Yunits
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Daniele Nicolodi <nicolodi@science.unitn.it>
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108 p = param({'yunits', ['The units of the final signal.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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109 paramValue.EMPTY_STRING);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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110 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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111
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Daniele Nicolodi <nicolodi@science.unitn.it>
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112 % X
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Daniele Nicolodi <nicolodi@science.unitn.it>
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113 p = param({'Timebase', ['An evenly sampled vector of time-samples (the x-axis) in which to embed the sine-wave.'...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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114 'This could also be a time-series AO in which case the x-vector from the AO will be used.']}, ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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115 paramValue.DOUBLE_VALUE(1:10));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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116 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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117
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Daniele Nicolodi <nicolodi@science.unitn.it>
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118 % P
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119 p = param({'P', ['A vector of parameter values [dc,A,f0,phi,t0,N]. These will override other settings.']}, ...
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120 paramValue.EMPTY_DOUBLE);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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121 pl.append(p);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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122
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Daniele Nicolodi <nicolodi@science.unitn.it>
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123 % set output
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Daniele Nicolodi <nicolodi@science.unitn.it>
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124 varargout{1} = pl;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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125
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126 case 'description'
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Daniele Nicolodi <nicolodi@science.unitn.it>
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127 varargout{1} = 'This version is version 1.';
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Daniele Nicolodi <nicolodi@science.unitn.it>
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128 case 'info'
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Daniele Nicolodi <nicolodi@science.unitn.it>
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129 % Add info calls for any other models that you use to build this
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Daniele Nicolodi <nicolodi@science.unitn.it>
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130 % model. For example:
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Daniele Nicolodi <nicolodi@science.unitn.it>
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131 % varargout{1} = [ ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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132 % ao_model_SubModel1('info', 'Some Version') ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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133 % ao_model_SubModel2('info', 'Another Version') ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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134 % ];
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Daniele Nicolodi <nicolodi@science.unitn.it>
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135 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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136 varargout{1} = [];
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Daniele Nicolodi <nicolodi@science.unitn.it>
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137 otherwise
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Daniele Nicolodi <nicolodi@science.unitn.it>
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138 error('unknown inputs');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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139 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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140 return;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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141 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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142
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Daniele Nicolodi <nicolodi@science.unitn.it>
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143 % build model
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Daniele Nicolodi <nicolodi@science.unitn.it>
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144 pl = varargin{1};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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145
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Daniele Nicolodi <nicolodi@science.unitn.it>
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146 % Get parameters
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Daniele Nicolodi <nicolodi@science.unitn.it>
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147 f0 = pl.find('f0');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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148 A = pl.find('A');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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149 phi = pl.find('phi');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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150 dc = pl.find('dc');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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151 N = pl.find('Ncycles');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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152 yunits = pl.find('yunits');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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153 X = pl.find('Timebase');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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154 t0 = pl.find('Tstart');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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155 P = pl.find('P');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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156
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Daniele Nicolodi <nicolodi@science.unitn.it>
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157 if isa(X, 'ao')
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Daniele Nicolodi <nicolodi@science.unitn.it>
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158 X = X.x;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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159 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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160
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Daniele Nicolodi <nicolodi@science.unitn.it>
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161 if ~isempty(P)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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162 if length(P) ~= 6
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Daniele Nicolodi <nicolodi@science.unitn.it>
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163 error('When providing a parameter vector, you must specify all 6 parameters [dc,A,f0,phi,t0,N].');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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164 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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165
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Daniele Nicolodi <nicolodi@science.unitn.it>
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166 % [dc,A,f0,phi,t0,N]
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Daniele Nicolodi <nicolodi@science.unitn.it>
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167 dc = P(1);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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168 A = P(2);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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169 f0 = P(3);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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170 phi = P(4);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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171 t0 = P(5);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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172 N = P(6);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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173 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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174
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Daniele Nicolodi <nicolodi@science.unitn.it>
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175 % The zeros vector
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Daniele Nicolodi <nicolodi@science.unitn.it>
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176 v = zeros(size(X));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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177
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Daniele Nicolodi <nicolodi@science.unitn.it>
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178 % Time-base for the sine-wave part
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Daniele Nicolodi <nicolodi@science.unitn.it>
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179 dt = X(2)-X(1); % assuming evenly sampled X here!
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Daniele Nicolodi <nicolodi@science.unitn.it>
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180 st = 0:dt:N/f0-dt;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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181
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Daniele Nicolodi <nicolodi@science.unitn.it>
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182 % The sine wave
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Daniele Nicolodi <nicolodi@science.unitn.it>
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183 s = dc + A*sin(2*pi*f0*st + phi*pi/180);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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184
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Daniele Nicolodi <nicolodi@science.unitn.it>
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185 % Embed that in the zeros now
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Daniele Nicolodi <nicolodi@science.unitn.it>
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186 idx = find(X>=t0);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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187 v(idx(1):idx(1)+length(s)-1) = s;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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188 % And truncate in case we over-ran the X vector
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Daniele Nicolodi <nicolodi@science.unitn.it>
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189 v = v(1:length(X));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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190
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Daniele Nicolodi <nicolodi@science.unitn.it>
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191 % Build a time-series data object
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Daniele Nicolodi <nicolodi@science.unitn.it>
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192 tsd = tsdata(X,v,1/dt);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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193
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Daniele Nicolodi <nicolodi@science.unitn.it>
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194 % Set X-units, Y-units
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Daniele Nicolodi <nicolodi@science.unitn.it>
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195 tsd.setXunits('s');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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196 tsd.setYunits(yunits);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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197
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Daniele Nicolodi <nicolodi@science.unitn.it>
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198 % Build the AO and set its name
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Daniele Nicolodi <nicolodi@science.unitn.it>
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199 a = ao(tsd);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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200
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Daniele Nicolodi <nicolodi@science.unitn.it>
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201 a.setName('PaddedSine');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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202
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Daniele Nicolodi <nicolodi@science.unitn.it>
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203 varargout{1} = a;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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204
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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205 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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206
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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207
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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208 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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209 % AUTHORS SHOULD NOT NEED TO EDIT BELOW HERE
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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210 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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211
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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212
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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213 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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214 % Get Version
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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215 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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216 function v = getVersion
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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217
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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218 v = '$Id: ao_model_padded_sine.m,v 1.2 2011/04/29 08:19:44 hewitson Exp $';
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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219
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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220 end