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annotate m-toolbox/classes/@ao/lincom.m @ 50:7d2e2e065cf1 database-connection-manager

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Update unit tests
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:24:37 +0100
parents f0afece42f48
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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1 % LINCOM make a linear combination of analysis objects
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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2 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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3 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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4 % DESCRIPTION: LINCOM makes a linear combination of the input analysis
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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5 % objects
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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6 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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7 % CALL: b = lincom(a1,a2,a3,...,aN,c)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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8 % b = lincom([a1,a2,a3,...,aN],c)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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9 % b = lincom(a1,a2,a3,...,aN,[c1,c2,c3,...,cN])
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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10 % b = lincom([a1,a2,a3,...,aN],[c1,c2,c3,...,cN])
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Daniele Nicolodi <nicolodi@science.unitn.it>
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11 % b = lincom(a1,a2,a3,...,aN,pl)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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12 % b = lincom([a1,a2,a3,...,aN],pl)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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13 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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14 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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15 % If no plist is specified, the last object should be:
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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16 % + an AO of type cdata with the coefficients inside OR
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
17 % + a vector of AOs of type cdata with individual coefficients OR
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
18 % + a pest object with the coefficients
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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19 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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20 % INPUTS: ai - a list of analysis objects of the same type
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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21 % c - analysis object OR pest object with coefficient(s)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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22 % pl - input parameter list
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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23 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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24 % OUTPUTS: b - output analysis object
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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25 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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26 % <a href="matlab:utils.helper.displayMethodInfo('ao', 'lincom')">Parameters Description</a>
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Daniele Nicolodi <nicolodi@science.unitn.it>
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27 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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28 % VERSION: $Id: lincom.m,v 1.38 2011/04/08 08:56:12 hewitson Exp $
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Daniele Nicolodi <nicolodi@science.unitn.it>
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29 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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30 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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Daniele Nicolodi <nicolodi@science.unitn.it>
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31
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Daniele Nicolodi <nicolodi@science.unitn.it>
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32 function varargout = lincom(varargin)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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33
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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34 %%% Check if this is a call for parameters
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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35 if utils.helper.isinfocall(varargin{:})
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Daniele Nicolodi <nicolodi@science.unitn.it>
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36 varargout{1} = getInfo(varargin{3});
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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37 return
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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38 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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39
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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40 import utils.const.*
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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41 utils.helper.msg(msg.PROC3, 'running %s/%s', mfilename('class'), mfilename);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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42
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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43 if nargout == 0
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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44 error('### lincom cannot be used as a modifier. Please give an output variable.');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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45 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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46
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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47 %%% Collect input variable names
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Daniele Nicolodi <nicolodi@science.unitn.it>
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48 in_names = cell(size(varargin));
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Daniele Nicolodi <nicolodi@science.unitn.it>
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49 for ii = 1:nargin
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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50 in_names{ii} = inputname(ii);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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51 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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52
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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53 % Collect all AOs and plists
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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54 [as, ao_invars, rest] = utils.helper.collect_objects(varargin(:), 'ao', in_names);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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55 [ps, ps_invars, rest] = utils.helper.collect_objects(rest(:), 'pest', in_names);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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56 pl = utils.helper.collect_objects(rest(:), 'plist', in_names);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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57
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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58 % Combine input PLIST with default PLIST
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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59 usepl = parse(pl, getDefaultPlist());
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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60
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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61 % Check inputs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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62 if numel(ps) > 1
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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63 error('### This method supports only one PEST object.')
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Daniele Nicolodi <nicolodi@science.unitn.it>
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64 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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65
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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66 % Get the length of the arguments
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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67 aosIdx = cellfun('isclass', varargin, 'ao');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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68 num_as = cellfun('length', varargin(aosIdx));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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69
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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70 coeffHist = [];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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71 if ~isempty(usepl.find('COEFFS'))
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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72 coeffObj = usepl.find('COEFFS');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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73 elseif numel(ps) == 1
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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74 coeffObj = ps;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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75 coeffHist = ps.hist;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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76 elseif isa(as(end).data, 'cdata') && as(end).len == numel(as(1:end-1))
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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77 % The last AOs have the coefficients
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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78 coeffObj = as(end);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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79 coeffHist = coeffObj.hist;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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80 % Remove the coefficients AOs from the data AOs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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81 as(end) = [];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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82 elseif all(num_as == 1) || num_as(end) == sum(num_as(1:end-1))
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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83 % list of single input AOs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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84 if mod(numel(as), 2) ~= 0
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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85 error('### If you insert a list of AOs must be the number of AOs even.')
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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86 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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87 coeffObj = as(numel(as)/2+1:end);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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88 coeffHist = [coeffObj.hist];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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89 % Remove the coefficients AOs from the data AOs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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90 as(numel(as)/2+1:end) = [];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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91 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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92 error('### Incorrect shape of input!');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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93 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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94
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
95 % Convert coefficient Object to an AO
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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96 if isa(coeffObj, 'ao')
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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97 elseif isa(coeffObj, 'pest')
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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98 coeffObj = coeffObj.find(coeffObj.names{:},'internal');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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99 elseif isnumeric(coeffObj)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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100 coeffObj = ao(coeffObj);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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101 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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102 error('### Unsupported data type ''%s'' of the coefficient.', class(coeffObj));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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103 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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104
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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105 % Checks that coefficients are cdata AO(s)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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106 for kk = 1:numel(coeffObj)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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107 if ~isa(coeffObj(kk).data, 'cdata')
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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108 error('### lincom can not be used on this data type.');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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109 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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110 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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111 coeffs = coeffObj.y;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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112 cunits = unit.initObjectWithSize(1, numel(coeffs));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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113 if numel(coeffObj) == 1
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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114 % Single coefficients AO, get the unit and make copies
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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115 for kk = 1:numel(coeffs)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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116 cunits(kk) = unit(coeffObj.yunits);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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117 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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118 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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119 % Array of coefficients AOs, get each unit separately
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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120 cunits = unit(coeffObj.yunits);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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121 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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122
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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123 na = length(as);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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124 nc = length(coeffs);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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125 if na ~= nc
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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126 disp(sprintf('Num AOs input: %d', na));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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127 disp(sprintf('Num Coeffs input: %d', nc));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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128 error('### specify one coefficient per analysis object.');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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129 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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130
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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131 % Make linear combination, collect name string, compute the new units
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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132 nstr = '';
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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133 y = zeros(size(as(1).data.getY));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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134
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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135 for kk = 1:nc
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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136 nstr = [nstr num2str(coeffs(kk)) '*' ao_invars{kk} ' + '];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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137 y = y + coeffs(kk).*as(kk).y;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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138 new_units(kk) = simplify(as(kk).yunits .* cunits(kk), plist('Prefixes',false));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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139 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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140 nstr = deblank(nstr(1:end-2));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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141 for kk = 1:nc-1
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
142 if ~eq(new_units(kk), new_units(kk+1))
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
143 error('### inconsistent units in data/coefficients');
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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144 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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145 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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146
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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147 % create new ao
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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148 b = ao;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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149 b.data = copy(as(1).data, 1);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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150 b.data.setY(y);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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151
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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152 %%% Set Name
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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153 b.name = nstr;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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154
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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155 %%% Set new Units
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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156 b.data.setYunits(new_units(1));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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157
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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158 %%% Propagate 'plotinfo'
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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159 plotinfo = [as(:).plotinfo];
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160 if ~isempty(plotinfo)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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161 b.plotinfo = combine(plotinfo);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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162 end
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163
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164 %%% Add History
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165 b.addHistory(getInfo('None'), usepl, [ao_invars ps_invars], [as.hist coeffHist]);
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166
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167 % Set output
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168 varargout{1} = b;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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169 end
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170
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171 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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172 % Local Functions %
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173 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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174
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Daniele Nicolodi <nicolodi@science.unitn.it>
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175 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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Daniele Nicolodi <nicolodi@science.unitn.it>
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176 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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177 % FUNCTION: getInfo
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178 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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179 % DESCRIPTION: Get Info Object
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180 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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181 % HISTORY: 11-07-07 M Hewitson
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Daniele Nicolodi <nicolodi@science.unitn.it>
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182 % Creation.
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Daniele Nicolodi <nicolodi@science.unitn.it>
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183 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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184 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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185
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Daniele Nicolodi <nicolodi@science.unitn.it>
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186 function ii = getInfo(varargin)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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187 if nargin == 1 && strcmpi(varargin{1}, 'None')
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Daniele Nicolodi <nicolodi@science.unitn.it>
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188 sets = {};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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189 pl = [];
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Daniele Nicolodi <nicolodi@science.unitn.it>
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190 else
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191 sets = {'Default'};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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192 pl = getDefaultPlist;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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193 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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194 % Build info object
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195 ii = minfo(mfilename, 'ao', 'ltpda', utils.const.categories.sigproc, '$Id: lincom.m,v 1.38 2011/04/08 08:56:12 hewitson Exp $', sets, pl);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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196 ii.setModifier(false);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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197 end
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198
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Daniele Nicolodi <nicolodi@science.unitn.it>
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199 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
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200 % Get Default Plist
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Daniele Nicolodi <nicolodi@science.unitn.it>
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201 %--------------------------------------------------------------------------
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Daniele Nicolodi <nicolodi@science.unitn.it>
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202 function plout = getDefaultPlist()
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Daniele Nicolodi <nicolodi@science.unitn.it>
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203 persistent pl;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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204 if exist('pl', 'var')==0 || isempty(pl)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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205 pl = buildplist();
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Daniele Nicolodi <nicolodi@science.unitn.it>
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206 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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207 plout = pl;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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208 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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209
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Daniele Nicolodi <nicolodi@science.unitn.it>
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210 function pl = buildplist()
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Daniele Nicolodi <nicolodi@science.unitn.it>
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211 pl = plist(...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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212 {'COEFFS',['A vector of AOs of type cdata with individual coefficients<br>' ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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213 'or a PEST containing a vector of coefficients<br>' ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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214 'or a vector of numeric coefficients.']}, paramValue.EMPTY_DOUBLE);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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215 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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216 % END
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217
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Daniele Nicolodi <nicolodi@science.unitn.it>
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218