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User friendlier errors from utils.mysql.connect
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Mon, 05 Dec 2011 18:04:03 +0100
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1 <h2>Description</h2>
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2 <p>
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3 The LTPDA method <a href="matlab:doc('ao/tfe')">ao/tfe</a> estimates the transfer function of time-series
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4 signals, included in the input <tt>ao</tt>s following the Welch's averaged, modified periodogram method <a href="#references">[1]</a>.
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5 Data are windowed prior to the estimation of the spectra, by multiplying
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6 it with a <a href="specwin.html">spectral window object</a>, and can be detrended by polinomial of time in order to reduce the impact
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7 of the border discontinuities. The window length is adjustable to shorter lenghts to reduce the spectral
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8 density uncertainties, and the percentage of subsequent window overlap can be adjusted as well.
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9 <br>
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10 <br>
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11 <h2>Syntax</h2>
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12 </p>
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13 <div class="fragment"><pre>
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14 <br> b = tfe(a1,a2,pl)
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15 </pre>
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16 </div>
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17 <p>
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18 <tt>a1</tt> and <tt>a2</tt> are the 2 <tt>ao</tt>s containing the input time series to be evaluated, <tt>b</tt> is the output object and
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19 <tt>pl</tt> is an optional parameters list.
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20 </p>
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21 <h2>Parameters</h2>
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22 The parameter list <tt>pl</tt> includes the following parameters:
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23 <ul>
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24 <li> <tt>'Nfft'</tt> - number of samples in each fft [default: length of input data]
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25 A string value containing the variable 'fs' can
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26 also be used, e.g., plist('Nfft', '2*fs') </li>
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27 <li> <tt>'Win'</tt> - the window to be applied to the data to remove the
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28 discontinuities at edges of segments. [default: taken from user prefs].<br>
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29 The window is described by a string with its name and, only in the case of Kaiser window,
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30 the additional parameter <tt>'psll'</tt>. <br>For instance: plist('Win', 'Kaiser', 'psll', 200). </li>
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31 <li> <tt>'Olap'</tt> - segment percent overlap [default: -1, (taken from window function)] </li>
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32 <li> <tt>'Order'</tt> - order of segment detrending <ul>
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33 <li> -1 - no detrending </li>
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34 <li> 0 - subtract mean [default] </li>
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35 <li> 1 - subtract linear fit </li>
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36 <li> N - subtract fit of polynomial, order N </li> </ul> </li>
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37 <li><tt>'Navs'</tt> - number of averages. If set, and if Nfft was set to 0 or -1, the number of points for each window will be calculated to match the request. [default: -1, not set] </li>
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38 <li><tt>'Times'</tt> - interval of time to evaluate the calculation on. If empty [default], it will take the whole section.</li>
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39 </ul>
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40 The length of the window is set by the value of the parameter <tt>'Nfft'</tt>, so that the window
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41 is actually rebuilt using only the key features of the window, i.e. the name and, for Kaiser windows, the PSLL.
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42 </p>
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43
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44 <p>As an alternative to setting the number of points <tt>'Nfft'</tt> in each window, it's possible to ask for a given number of TFE estimates by setting the <tt>'Navs'</tt> parameter, and the algorithm takes care of calculating the correct window length, according to the amount of overlap between subsequent segments.</p>
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45 <p>
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46 <table cellspacing="0" class="note" summary="Note" cellpadding="5" border="1">
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47 <tr width="90%">
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48 <td>
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49 If the user doesn't specify the value of a given parameter, the default value is used.
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50 </td>
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51 </tr>
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52 </table>
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53 </p>
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54
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55 <p>The function makes transfer functions estimates between the 2 input <tt>ao</tt>s, and the output will contain the transfer function estimate from the first <tt>ao</tt> to the second.</p>
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56 <h2>Algorithm</h2>
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57 <p>
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58 The algorithm is based in standard MATLAB's tools, as the ones used by <a href="matlab:doc('pwelch')">pwelch</a>. The standard deviation of the mean
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59 is computed as
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60 <div align="center">
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61 <img src="images/tfe_sigma1.png" >
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62 </div>
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63 where
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64 <div align="center">
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65 <img src="images/tfe_sigma2.png" >
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66 </div>
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67 is the coherence function.
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68 </p>
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69 <h2>Example</h2>
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70 <p>
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71 Evaluation of the transfer function between two time-series represented by:
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72 a low frequency sinewave signal superimposed to
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73 white noise, and a low frequency sinewave signal at the same frequency, phase shifted and with different
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74 amplitude, superimposed to white noise.
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75 </p>
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76 <div class="fragment"><pre>
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77 <br> <span class="comment">% parameters</span>
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78 nsecs = 1000;
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79 fs = 10;
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80
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81 <span class="comment">% create first signal AO</span>
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82 x = ao(plist(<span class="string">'waveform'</span>,<span class="string">'sine wave'</span>,<span class="string">'f'</span>,0.1,<span class="string">'A'</span>,1,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs)) + ...
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83 ao(plist(<span class="string">'waveform'</span>,<span class="string">'noise'</span>,<span class="string">'type'</span>,<span class="string">'normal'</span>,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs));
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84 x.setYunits(<span class="string">'m'</span>);
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85
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86 <span class="comment">% create second signal AO</span>
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87 y = ao(plist(<span class="string">'waveform'</span>,<span class="string">'sine wave'</span>,<span class="string">'f'</span>,0.1,<span class="string">'A'</span>,2,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs,<span class="string">'phi'</span>,90)) + ...
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88 0.1*ao(plist(<span class="string">'waveform'</span>,<span class="string">'noise'</span>,<span class="string">'type'</span>,<span class="string">'normal'</span>,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs));
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89 y.setYunits(<span class="string">'rad'</span>);
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90
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91 <span class="comment">% compute transfer function</span>
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92 nfft = 1000;
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93 psll = 200;
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94 Txy = tfe(x,y,plist(<span class="string">'win'</span>,<span class="string">'Kaiser'</span>,<span class="string">'psll'</span>,psll,<span class="string">'nfft'</span>,nfft));
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95
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96 <span class="comment">% plot</span>
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97 iplot(Txy)
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98 </pre>
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99 </div>
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100 <br>
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101 <img src="images/transfer_1.png" alt="" border="3">
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102
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103 <h2><a name="references">References</a></h2>
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104
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105 <ol>
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106 <li> P.D. Welch, The Use of Fast Fourier Transform for the Estimation of Power Spectra: A Method Based on Time Averaging Over Short,
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107 Modified Periodograms, <i>IEEE Trans. on Audio and Electroacoustics</i>, Vol. 15, No. 2 (1967), pp. 70 - 73.</a></li>
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108 </ol>
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109
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110