Mercurial > hg > ltpda

annotate m-toolbox/classes/@smodel/fromDatafile.m @ 52:daf4eab1a51e database-connection-manager tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Fix. Default password should be [] not an empty string
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:29:47 +0100
parents f0afece42f48
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
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Daniele Nicolodi <nicolodi@science.unitn.it>
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1 % FROMDATAFILE Construct smodel object from filename AND parameter list
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Daniele Nicolodi <nicolodi@science.unitn.it>
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2 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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Daniele Nicolodi <nicolodi@science.unitn.it>
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3 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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4 % FUNCTION: fromDatafile
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Daniele Nicolodi <nicolodi@science.unitn.it>
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5 %
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6 % DESCRIPTION: Construct smodel object from filename AND parameter list
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7 %
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8 % CALL: a = fromFilenameAndPlist(a, pli)
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9 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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10 % PARAMETER: a: empty ltpda-model-object
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11 % pli: plist-object (must contain the filename)
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12 %
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13 % FORMAT: The text file must have the following format:
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14 %
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15 % - Blank lines are ignored
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16 % - Lines starting with a hash (#) are ignored
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Daniele Nicolodi <nicolodi@science.unitn.it>
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17 % (* see description part
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Daniele Nicolodi <nicolodi@science.unitn.it>
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18 % - The first continuous comment block will be put into the
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Daniele Nicolodi <nicolodi@science.unitn.it>
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19 % description field
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Daniele Nicolodi <nicolodi@science.unitn.it>
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20 % - The values for the model are defined with some keywords
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Daniele Nicolodi <nicolodi@science.unitn.it>
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21 % - Use only one line for a value
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Daniele Nicolodi <nicolodi@science.unitn.it>
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22 % - A colon after a keyword can be optionally inserted
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Daniele Nicolodi <nicolodi@science.unitn.it>
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23 % - The following keywords (inside the quotes) are mandatory
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Daniele Nicolodi <nicolodi@science.unitn.it>
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24 % and must be at the beginning of a line.
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Daniele Nicolodi <nicolodi@science.unitn.it>
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25 % 'expr' - the expression of the model
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Daniele Nicolodi <nicolodi@science.unitn.it>
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26 % 'params' - parameters which are used in the model
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Daniele Nicolodi <nicolodi@science.unitn.it>
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27 % 'values' - default values for the parameters
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28 % 'xvar' - X-variable
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29 % - The following keywords are optional
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30 % 'xunits' - units of the x-axis
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Daniele Nicolodi <nicolodi@science.unitn.it>
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31 % 'yunits' - units of the y-axis
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Daniele Nicolodi <nicolodi@science.unitn.it>
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32 % 'xvals' - values for the X-variable
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Daniele Nicolodi <nicolodi@science.unitn.it>
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33 % - It is possible to read more than one model from a file.
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Daniele Nicolodi <nicolodi@science.unitn.it>
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34 % Use for this the indeces behind the keywords. For example
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Daniele Nicolodi <nicolodi@science.unitn.it>
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35 % expr(1,2): ...
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36 % expr(3) ...
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Daniele Nicolodi <nicolodi@science.unitn.it>
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37 % - It is necessary that each mandatory keyword have an entry
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Daniele Nicolodi <nicolodi@science.unitn.it>
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38 % for each index. If a keyword have only one entry then will
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Daniele Nicolodi <nicolodi@science.unitn.it>
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39 % be this enty copied to all other models.
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40 %
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41 % VERSION: $Id: fromDatafile.m,v 1.2 2011/08/15 13:12:17 hewitson Exp $
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42 %
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43 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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44
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Daniele Nicolodi <nicolodi@science.unitn.it>
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45 function mdl = fromDatafile(mdlin, pli)
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46
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47 utils.helper.msg(utils.const.msg.PROC1, 'constructing from filename and/or plist');
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48
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49 VERSION = '$Id: fromDatafile.m,v 1.2 2011/08/15 13:12:17 hewitson Exp $';
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50
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Daniele Nicolodi <nicolodi@science.unitn.it>
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51 % get ltpda-model info
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Daniele Nicolodi <nicolodi@science.unitn.it>
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52 mi = smodel.getInfo('smodel', 'From ASCII File');
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53
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Daniele Nicolodi <nicolodi@science.unitn.it>
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54 % Set the method version string in the minfo object
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Daniele Nicolodi <nicolodi@science.unitn.it>
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55 mi.setMversion([VERSION '-->' mi.mversion]);
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56
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57 % Get filename
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Daniele Nicolodi <nicolodi@science.unitn.it>
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58 file_name = find(pli, 'filename');
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59
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60 [pathstr, f_name, ext] = fileparts(file_name);
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61
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62 %%%%%%%%%% Get default parameter list %%%%%%%%%%
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63 dpl = smodel.getDefaultPlist('From ASCII File');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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64 pl = applyDefaults(dpl, pli);
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65
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66 pl = pset(pl, 'filename', [f_name ext]);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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67 pl = pset(pl, 'filepath', pathstr);
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68
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Daniele Nicolodi <nicolodi@science.unitn.it>
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69 dxunits = pl.find('xunits');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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70 dyunits = pl.find('yunits');
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71 dxvals = pl.find('xvals');
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72 ddesc = pl.find('description');
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73
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74 %%%%%%%%%% read file %%%%%%%%%%
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75 [fid,msg] = fopen (file_name, 'r');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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76 if (fid < 0)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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77 error ('### can not open file: %s \n### error msg: %s',file_name, msg);
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78 end
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79
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80 firstCommentBlock = true;
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81
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82 desc = '';
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83 expr = {};
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84 params = {};
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85 xvar = {};
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86 values = {};
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87
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88 xvals = {};
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89 xunits = {};
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90 yunits = {};
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91
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92 while ~feof(fid)
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93
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94 fline = fgetl(fid);
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95 fline = strtrim(fline);
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96
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97 if isempty(fline)
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98 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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99 elseif fline(1) == '#'
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100 if firstCommentBlock && ~isempty(strtrim(fline(2:end)))
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101 desc = [desc, strtrim(fline(2:end)), '\n'];
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102 end
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103
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Daniele Nicolodi <nicolodi@science.unitn.it>
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104 elseif strcmpi(fline(1:4), 'expr')
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105 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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106 [i,j,txt] = parseLine(fline, 'expr');
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107 expr{i,j} = txt;
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108
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109 elseif strcmpi(fline(1:6), 'params')
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110 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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111 [i,j,txt] = parseLine(fline, 'params');
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112 params{i,j} = txt;
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113
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114 elseif strcmpi(fline(1:4), 'xvar')
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115 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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116 [i,j,txt] = parseLine(fline, 'xvar');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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117 xvar{i,j} = txt;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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118
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119 elseif strcmpi(fline(1:6), 'values')
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120 firstCommentBlock = isFirstCommentBlock(desc);
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121 [i,j,txt] = parseLine(fline, 'values');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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122 values{i,j} = txt;
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123
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124 elseif strcmpi(fline(1:5), 'xvals')
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125 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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126 [i,j,txt] = parseLine(fline, 'xvals');
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127 xvals{i,j} = txt;
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128
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129 elseif strcmpi(fline(1:6), 'xunits')
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130 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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131 [i,j,txt] = parseLine(fline, 'xunits');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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132 xunits{i,j} = txt;
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133
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134 elseif strcmpi(fline(1:6), 'yunits')
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135 firstCommentBlock = isFirstCommentBlock(desc);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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136 [i,j,txt] = parseLine(fline, 'yunits');
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Daniele Nicolodi <nicolodi@science.unitn.it>
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137 yunits{i,j} = txt;
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Daniele Nicolodi <nicolodi@science.unitn.it>
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138
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139 end
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140
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141 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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142 fclose(fid);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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143
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Daniele Nicolodi <nicolodi@science.unitn.it>
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144 % Get maximum size of the smodel matrix
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Daniele Nicolodi <nicolodi@science.unitn.it>
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145 maxi = max([size(expr,1), size(params,1), size(xvar,1), size(values,1), size(xvals,1), size(xunits,1), size(yunits,1)]);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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146 maxj = max([size(expr,2), size(params,2), size(xvar,2), size(values,2), size(xvals,2), size(xunits,2), size(yunits,2)]);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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147
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Daniele Nicolodi <nicolodi@science.unitn.it>
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148 % Make some plausibly checks
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Daniele Nicolodi <nicolodi@science.unitn.it>
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149 % 1) Replicate the array to the maximum size of the used indices if the
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Daniele Nicolodi <nicolodi@science.unitn.it>
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150 % array have only one input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
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151 % 2) The array must have the same size as the used indices.
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Daniele Nicolodi <nicolodi@science.unitn.it>
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152 if isempty(xunits)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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153 xunits = {dxunits};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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154 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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155 if isempty(yunits)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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156 yunits = {dyunits};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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157 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
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158 if isempty(xvals)
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Daniele Nicolodi <nicolodi@science.unitn.it>
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159 xvals = {dxvals};
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Daniele Nicolodi <nicolodi@science.unitn.it>
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160 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
161 if ~isempty(ddesc)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
162 desc = ddesc;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
163 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
164 expr = checkArray(expr, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
165 params = checkArray(params, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
166 xvar = checkArray(xvar, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
167 values = checkArray(values, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
168 xvals = checkArray(xvals, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
169 xunits = checkArray(xunits, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
170 yunits = checkArray(yunits, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
171
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
172 mdl = smodel.newarray([maxi, maxj]);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
173
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
174 % Check mandatory fields
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
175 if isempty(expr) || isempty(params) || isempty(xvar) || isempty(values)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
176 error('### At least one of the mandatory fields (''expr'', ''params'', ''xvar'', ''values'') is empty.');
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
177 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
178
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
179 % Create Object
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
180 for ii = 1:numel(mdl)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
181
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
182 % mandatory fields
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
183 mdl(ii).expr = expr{ii};
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
184 mdl(ii).params = regexp(strtrim(params{ii}), ',', 'split');
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
185 mdl(ii).xvar = xvar{ii};
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
186 mdl(ii).values = cellfun(@str2num, regexp(strtrim(values{ii}), ',', 'split'));
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
187
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
188 % Optional fields
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
189 if ~isempty(xvals)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
190 if ischar(xvals{ii})
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
191 mdl(ii).xvals = eval(xvals{ii});
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
192 else
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
193 mdl(ii).xvals = xvals{ii};
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
194 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
195 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
196 if ~isempty(xunits)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
197 mdl(ii).xunits = xunits{ii};
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
198 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
199 if ~isempty(yunits)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
200 mdl(ii).yunits = yunits{ii};
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
201 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
202 mdl(ii).description = desc(1:end-2); % remove the last break
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
203 mdl(ii).addHistory(mi, pl, [], []);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
204
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
205 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
206
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
207 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
208
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
209 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
210 % Local Functions %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
211 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
212
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
213 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
214 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
215 % FUNCTION: fromDatafile
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
216 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
217 % DESCRIPTION:
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
218 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
219 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
220 function flag = isFirstCommentBlock(desc)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
221 if isempty(desc)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
222 flag = true;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
223 else
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
224 flag = false;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
225 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
226 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
227
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
228 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
229 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
230 % FUNCTION: getIndex
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
231 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
232 % DESCRIPTION: Returns the index of the input string.
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
233 % '(3,2)' -> i=3, j=2
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
234 % '(3)' -> i=3, default: j=1
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
235 % '()' -> default i=1, default: j=1
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
236 % '' -> default i=1, default: j=1
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
237 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
238 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
239 function [i,j] = getIndex(token)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
240 ij = regexp(token, '\d*', 'match');
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
241 if numel(ij) == 2
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
242 i = eval(ij{1});
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
243 j = eval(ij{2});
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
244 elseif numel(ij) == 1
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
245 i = eval(ij{1});
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
246 j = 1;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
247 else
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
248 i = 1;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
249 j = 1;
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
250 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
251 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
252
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
253 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
254 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
255 % FUNCTION: parseLine
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
256 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
257 % DESCRIPTION: Returns the indices i,j and the remaining value for the
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
258 % given field.
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
259 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
260 % Example: expr: a+b*t -> i=1, j=1, txt=a+b*t
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
261 % expr a+b*t -> i=1, j=1, txt=a+b*t
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
262 % expr(3) a+b*t -> i=3, j=1, txt=a+b*t
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
263 % expr(3,2): a+b*t -> i=3, j=2, txt=a+b*t
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
264 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
265 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
266 function [i,j,txt] = parseLine(lineIn, field)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
267 exp = [field '(?<idx>\(\d*(,\d*)?\))?:? *'];
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
268 idx = regexp(lineIn, exp, 'end');
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
269 ij = regexp(lineIn, exp, 'names');
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
270 [i,j] = getIndex(ij(1).idx);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
271 txt = lineIn(idx+1:end);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
272 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
273
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
274 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
275 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
276 % FUNCTION: checkArray
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
277 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
278 % DESCRIPTION: There are the following rules
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
279 % 1) If the array have only one input then replicate this
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
280 % input to the maximum size of the used indices.
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
281 % 2) Throw an error if the inputs are more than one but not so
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
282 % much as the maximum of the used indices.
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
283 %
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
284 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
285 function array = checkArray(array, maxi, maxj)
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
286 if numel(array) == 0
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
287 % Do nothing
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
288 elseif numel(array) == 1
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
289 array = repmat(array, maxi, maxj);
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
290 elseif size(array,1) ~= maxi || size(array,2) ~= maxj
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
291 error('### One model is not well defined. Max (i,j) = (%d,%d) but only used (%d,%d)', maxi, maxj, size(array,1), size(array,2));
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
292 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
293 end
f0afece42f48 Import.
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
294