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+ − 1 <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
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+ − 2 "http://www.w3.org/TR/1999/REC-html401-19991224/loose.dtd">
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+ − 3
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+ − 4 <html lang="en">
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+ − 5 <head>
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+ − 6 <meta name="generator" content=
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+ − 7 "HTML Tidy for Mac OS X (vers 1st December 2004), see www.w3.org">
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+ − 8 <meta http-equiv="Content-Type" content=
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+ − 9 "text/html; charset=us-ascii">
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+ − 10
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+ − 11 <title>Submitting LTPDA objects to a repository (LTPDA Toolbox)</title>
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+ − 12 <link rel="stylesheet" href="docstyle.css" type="text/css">
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+ − 13 <meta name="generator" content="DocBook XSL Stylesheets V1.52.2">
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+ − 14 <meta name="description" content=
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+ − 15 "Presents an overview of the features, system requirements, and starting the toolbox.">
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+ − 16 </head>
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+ − 17
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+ − 18 <body>
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+ − 19 <a name="top_of_page" id="top_of_page"></a>
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+ − 20
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+ − 21 <p style="font-size:1px;"> </p>
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+ − 22
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+ − 23 <table class="nav" summary="Navigation aid" border="0" width=
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+ − 24 "100%" cellpadding="0" cellspacing="0">
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+ − 25 <tr>
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+ − 26 <td valign="baseline"><b>LTPDA Toolbox</b></td><td><a href="../helptoc.html">contents</a></td>
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+ − 27
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+ − 28 <td valign="baseline" align="right"><a href=
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+ − 29 "repo_connect.html"><img src="b_prev.gif" border="0" align=
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+ − 30 "bottom" alt="Connecting to an LTPDA Repository"></a> <a href=
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+ − 31 "repo_explore.html"><img src="b_next.gif" border="0" align=
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+ − 32 "bottom" alt="Exploring an LTPDA Repository"></a></td>
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+ − 33 </tr>
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+ − 34 </table>
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+ − 35
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+ − 36 <h1 class="title"><a name="f3-12899" id="f3-12899"></a>Submitting LTPDA objects to a repository</h1>
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+ − 37 <hr>
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+ − 38
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+ − 39 <p>
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+ − 40 <p>
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+ − 41 Any of the <it>user</it> objects can be submitted to an LTPDA repository
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+ − 42 </p>
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+ − 43
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+ − 44 <p>
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+ − 45 There are three different methods which submit/update object(s) to the repository:
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+ − 46 <ul>
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+ − 47 <li><h3>submit</h3>
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+ − 48 Submits the given collection of objects to an LTPDA Repository. If multiple objects
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+ − 49 are submitted together, a corresponding collection entry will be made. The objects
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+ − 50 are stored as a XML representation <b>and</b> if possible a binary representation
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+ − 51 (see bsubmit).</li>
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+ − 52 <li><h3>bsubmit</h3>
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+ − 53 Submits the given collection of objects to an LTPDA Repository. If multiple objects
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+ − 54 are submitted together, a corresponding collection entry will be made. The objects
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+ − 55 are stored <b>only</b> as a binary representation.<br />
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+ − 56 In order to retrieve this object by calling a constructor it is necessary to
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+ − 57 set the key <tt>'BINARY'</tt> to 'yes' because the XML representation doesn't exist.
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+ − 58 For example the AO constructor
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+ − 59 <a href="matlab:web(ao.getInfo('ao', 'from repository').tohtml, '-helpbrowser')">'From Repository'</a>
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+ − 60 </li>
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+ − 61 <li><h3>update</h3>
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+ − 62 Updates the specified object with a new object.
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+ − 63 </li>
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+ − 64 </ul>
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+ − 65 </p>
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+ − 66
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+ − 67 <h2>The submission process</h2>
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+ − 68
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+ − 69 <p>
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+ − 70 When an object is submitted, the following steps are taken:<br />
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+ − 71 <ol>
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+ − 72 <li>The <tt>userid</tt> of the user connecting is retrieved from the <it>Users</it> table of the repository</li>
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+ − 73 <li>For each object to be submitted:
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+ − 74 <ol>
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+ − 75 <li>The object to be submitted is checked to be one of the types listed above</li>
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+ − 76 <li>The <tt>name</tt>, <tt>created</tt>, and <tt>version</tt> fields are read from the object</li>
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+ − 77 <li>The object is converted to an XML text string</li>
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+ − 78 <li>An MD5 hash sum is computed for the XML string</li>
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+ − 79 <li>The XML string and the hash code are inserted in to the <tt>objs</tt> table</li>
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+ − 80 <li>The automatically assigned ID of the object is retrieved from the <tt>objs</tt> table</li>
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+ − 81 <li>An attempt is made to create a binary representation of the object (.MAT). If this is possible, the binary data is inserted in the <tt>bobjs</tt> table.</li>
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+ − 82 <li>Various pieces of meta-data (object name, object type, created time, client IP address, <i>etc.</i>) are submitted to the <tt>objmeta</tt> table</li>
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+ − 83 <li>Additional meta-data is entered into the table matching the object class (<tt>ao</tt>, <tt>tsdata</tt>, <i>etc.</i>)</li>
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+ − 84 <li>An 'in' entry is made in the <tt>transaction</tt> table recording the user ID and the object ID</li>
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+ − 85 </ol>
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+ − 86 </li>
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+ − 87 <li>A entry is then made in the <tt>collections</tt> table, even if this is a single object submission</li>
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+ − 88 <li>The object IDs and the collection ID are returned to the user</li>
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+ − 89 </ol>
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+ − 90 </p>
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+ − 91
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+ − 92 <br />
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+ − 93 <h2>Submitting objects</h2>
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+ − 94
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+ − 95 <p>
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+ − 96 Objects can be submitted using the command <tt>submit</tt>. This command takes at least two inputs:
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+ − 97 <table border="1" cellpadding="2" width="30%" bgcolor="#DDDDDD">
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+ − 98 <tr valign="top">
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+ − 99 <td><tt>object</tt></td><td>The object(s) to submit</td>
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+ − 100 </tr>
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+ − 101 <tr valign="top">
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+ − 102 <td><tt>pl</tt></td><td>A plist containing various pieces of information (see below)</td>
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+ − 103 </tr>
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+ − 104 </table>
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+ − 105 </p>
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+ − 106 <p>
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+ − 107 The <tt>plist</tt> details can be found at: <a href="matlab:web(ltpda_uo.getInfo('submit').tohtml, '-helpbrowser')">Parameter Sets</a>
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+ − 108 </p>
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+ − 109 <p>
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+ − 110 The following example script connects to a repository and submits an AO:
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+ − 111 <div class="fragment"><pre>
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+ − 112
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+ − 113 <span class="comment">% Connect to a repository</span>
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+ − 114 conn = utils.jmysql.connect(<span class="string">'localhost'</span>, <span class="string">'ltpda_test'</span>);
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+ − 115
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+ − 116 <span class="comment">% Load the AO</span>
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+ − 117 a = ao(<span class="string">'result.xml'</span>);
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+ − 118
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+ − 119 <span class="comment">% Build an information plist</span>
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+ − 120 pl = plist;
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+ − 121 pl.append(<span class="string">'conn'</span>, conn);
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+ − 122 pl.append(<span class="string">'experiment title'</span>, <span class="string">'Interferometer noise'</span>);
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+ − 123 pl.append(<span class="string">'experiment description'</span>, <span class="string">'Spectral estimation of interferometer output signal'</span>);
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+ − 124 pl.append(<span class="string">'analysis description'</span>, <span class="string">'Spectrum of the recorded signal'</span>);
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+ − 125 pl.append(<span class="string">'quantity'</span>, <span class="string">'photodiode output'</span>);
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+ − 126 pl.append(<span class="string">'keywords'</span>, <span class="string">'interferometer, noise, spectrum'</span>);
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+ − 127 pl.append(<span class="string">'reference ids'</span>, <span class="string">''</span>);
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+ − 128 pl.append(<span class="string">'additional comments'</span>, <span class="string">'none'</span>);
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+ − 129 pl.append(<span class="string">'additional authors'</span>, <span class="string">'no one'</span>);
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+ − 130
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+ − 131 <span class="comment">% Submit the AO</span>
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+ − 132 [ids, cid] = submit(a, pl);
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+ − 133
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+ − 134 <span class="comment">% Close the connection</span>
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+ − 135 conn.closeConnection
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+ − 136 </pre></div>
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+ − 137 The ID assigned to the submitted object is contained in the first output of the <tt>submit</tt> function:
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+ − 138 <div class="fragment"><pre>
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+ − 139 <span class="comment">% Inspect the object ID</span>
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+ − 140 disp(ids)
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+ − 141 212
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+ − 142 </pre></div>
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+ − 143 If the <tt>plist</tt> contains sufficient information, it is possible to overide the appearance of the
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+ − 144 'submission' dialog by giving the key/value pair: 'no dialog', <tt>true</tt>.
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+ − 145 </p>
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+ − 146
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+ − 147 <h2>Submitting collections</h2>
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+ − 148 <p>
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+ − 149 Collections of LTPDA objects can also be submitted. Here a collection is defined as a group of objects
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+ − 150 submitted at the same time. In this way, a single information structure describing the collection is
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+ − 151 assigned to all the objects. The collection is just a virtual object; it is defined by a list of object IDs in the database.
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+ − 152 </p>
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+ − 153
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+ − 154
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+ − 155 </p>
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+ − 156
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+ − 157 <br>
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+ − 158 <br>
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+ − 159 <table class="nav" summary="Navigation aid" border="0" width=
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+ − 160 "100%" cellpadding="0" cellspacing="0">
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+ − 161 <tr valign="top">
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+ − 162 <td align="left" width="20"><a href="repo_connect.html"><img src=
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+ − 163 "b_prev.gif" border="0" align="bottom" alt=
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+ − 164 "Connecting to an LTPDA Repository"></a> </td>
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+ − 165
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+ − 166 <td align="left">Connecting to an LTPDA Repository</td>
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+ − 167
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+ − 168 <td> </td>
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+ − 169
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+ − 170 <td align="right">Exploring an LTPDA Repository</td>
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+ − 171
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+ − 172 <td align="right" width="20"><a href=
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+ − 173 "repo_explore.html"><img src="b_next.gif" border="0" align=
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+ − 174 "bottom" alt="Exploring an LTPDA Repository"></a></td>
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+ − 175 </tr>
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Daniele Nicolodi <nicolodi@science.unitn.it>
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