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annotate m-toolbox/classes/+utils/@xml/read_sinfo_xml.m @ 52:daf4eab1a51e database-connection-manager tip

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Fix. Default password should be [] not an empty string
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:29:47 +0100
parents f0afece42f48
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Daniele Nicolodi <nicolodi@science.unitn.it>
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1 % READ_SINFO_XML reads a submission info struct from a simple XML file.
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2 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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3 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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4 % READ_SINFO_XML reads a submission info struct from a simple XML file.
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5 %
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6 % CALL: sinfo = utils.helper.read_sinfo_xml(file)
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7 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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8 % The XML file should have a main node called 'submission_info'. Then all
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9 % sub-nodes supported by the sinfo fields will be read.
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10 %
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11 % For example:
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12 %
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13 % <submission_info>
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14 % <experiment_title>
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15 % some nice experiment we can use
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16 % </experiment_title>
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17 % <experiment_description>
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18 % Some nice experiment we did with some crazy results.
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19 % But sometimes it takes a new line to describe in detail.
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20 % </experiment_description>
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21 % </submission_info>
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22 %
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23 % Supported fields:
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24 %
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25 % 'experiment_title'
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26 % 'experiment_description'
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Daniele Nicolodi <nicolodi@science.unitn.it>
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27 % 'analysis_description'
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28 % 'quantity'
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29 % 'keywords'
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30 % 'reference_ids'
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31 % 'additional_comments'
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32 % 'additional_authors'
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33 %
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34 % M Hewitson 08-02-10
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35 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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36 % $Id: read_sinfo_xml.m,v 1.1 2010/04/19 14:31:05 ingo Exp $
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37 %
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38
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39 function pl = read_sinfo_xml(file)
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40
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41 xdoc = xmlread(file);
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42
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43 fields = {'experiment_title', ...
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44 'experiment_description', ...
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45 'analysis_description', ...
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46 'quantity', ...
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47 'keywords', ...
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48 'reference_ids', ...
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49 'additional_comments',...
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50 'additional_authors'};
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51
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52 pl = plist();
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53 % Look for a submission info node
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54 for ii=1:xdoc.getLength
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55 item = xdoc.item(ii-1);
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Daniele Nicolodi <nicolodi@science.unitn.it>
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56 if strcmp(char(item.getNodeName), 'submission_info')
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Daniele Nicolodi <nicolodi@science.unitn.it>
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57 % Now get all the fields
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Daniele Nicolodi <nicolodi@science.unitn.it>
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58 for kk=1:item.getLength
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59 node = item.item(kk-1);
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60 name = char(node.getNodeName);
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61 if any(strcmp(name, fields))
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62 pl.append(name, strtrim(char(node.getTextContent)));
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63 end
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64 end
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65 end
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66 end
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67
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68 end