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Fix. Default password should be [] not an empty string
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:29:47 +0100
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1 <h2>Description</h2>
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2 <p>
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3 The LTPDA method <a href="matlab:doc('ao/ltfe')">ao/ltfe</a> estimates the transfer function of time-series
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4 signals, included in the input <tt>ao</tt>s following the LPSD algorithm <a href="#references">[1]</a>. Spectral density estimates are not
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5 evaluated at frequencies which are linear multiples of the minimum frequency resolution <tt>1/T</tt>, where <tt>T</tt>
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6 is the window lenght, but on a logarithmic scale. The algorithm takes care of calculating the frequencies at which to evaluate
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7 the spectral estimate, aiming at minimizing the uncertainty in the estimate itself, and to recalculate a suitable
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8 window length for each frequency bin.
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9 </p>
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10 <p>
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11 Data are windowed prior to the estimation of the spectrum, by multiplying
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12 it with a <a href="specwin.html">spectral window object</a>, and can be detrended by polinomial of time in order to reduce the impact
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13 of the border discontinuities. Detrending is performed on each individual window.
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14 The user can choose the quantity being given in output among ASD (amplitude spectral density),
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15 PSD (power spectral density), AS (amplitude spectrum), and PS (power spectrum).
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16 </p>
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17 <br>
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18 <h2>Syntax</h2>
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19 </p>
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20 <div class="fragment"><pre>
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21 <br> b = ltfe(a1,a2,pl)
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22 </pre>
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23 </div>
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24 <p>
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25 <tt>a1</tt> and <tt>a2</tt> are the 2 <tt>ao</tt>s containing the input time series to be evaluated, <tt>b</tt> is the output object and <tt>pl</tt> is an optional parameter list.
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26
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27 <h2>Parameters</h2>
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28 <p>The parameter list <tt>pl</tt> includes the following parameters:</p>
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29 <ul>
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30 <li> <tt>'Kdes'</tt> - desired number of averages [default: 100]</li>
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31 <li> <tt>'Jdes'</tt> - number of spectral frequencies to compute [default: 1000]</li>
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32 <li> <tt>'Lmin'</tt> - minimum segment length [default: 0]</li>
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33 <li> <tt>'Win'</tt> - the window to be applied to the data to remove the
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34 discontinuities at edges of segments. [default: taken from user prefs].<br>
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35 The window is described by a string with its name and, only in the case of Kaiser window,
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36 the additional parameter <tt>'psll'</tt>. <br>For instance: plist('Win', 'Kaiser', 'psll', 200). </li>
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37 <li> <tt>'Olap'</tt> - segment percent overlap [default: -1, (taken from window function)] </li>
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38 <li> <tt>'Order'</tt> - order of segment detrending <ul>
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39 <li> -1 - no detrending </li>
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40 <li> 0 - subtract mean [default] </li>
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41 <li> 1 - subtract linear fit </li>
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42 <li> N - subtract fit of polynomial, order N </li> </ul> </li>
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43 </ul>
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44 The length of the window is set by the value of the parameter <tt>'Nfft'</tt>, so that the window
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45 is actually rebuilt using only the key features of the window, i.e. the name and, for Kaiser windows, the PSLL.
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46 </p>
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47
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48 <p>
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49 <table cellspacing="0" class="note" summary="Note" cellpadding="5" border="1">
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50 <tr width="90%">
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51 <td>
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52 If the user doesn't specify the value of a given parameter, the default value is used.
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53 </td>
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54 </tr>
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55 </table>
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56 </p>
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57
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58 </p>
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59 <p>The function makes logaritmic frequencyscale transfer functions estimates between the 2 input <tt>ao</tt>s, and the output will contain the transfer function estimate from the first <tt>ao</tt> to the second.</p>
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60
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61 </pre> </div>
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62 </p>
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63 <h2>Algorithm</h2>
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64 <p>
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65 The algorithm is implemented according to <a href="#references">[1]</a>. The sample variance is computed according to:
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66 </p>
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67 <div align="center">
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68 <img src="images/tfe_sigma1.png" >
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69 </div>
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70 where
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71 <div align="center">
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72 <img src="images/tfe_sigma2.png" >
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73 </div>
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74 <br>
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75 <p>
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76 is the coherence function.
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77 In the LPSD algorithm, the first frequencies bins are usually computed using a single segment containing all the data.
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78 For these bins, the standard deviation of the mean is set to <tt>Inf</tt>.
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79 </p>
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80 <h2>Example</h2>
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81 <p>
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82 Evaluation of the transfer function between two time-series represented by:
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83 a low frequency sinewave signal superimposed to
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84 white noise, and a low frequency sinewave signal at the same frequency, phase shifted and with different
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85 amplitude, superimposed to white noise.
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86 </p>
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87 <div class="fragment"><pre>
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88 <br> <span class="comment">% Parameters</span>
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89 nsecs = 1000;
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90 fs = 10;
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91 nfft = 1000;
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92
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93 <span class="comment">% Create input AOs</span>
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94 x = ao(plist(<span class="string">'waveform'</span>,<span class="string">'sine wave'</span>,<span class="string">'f'</span>,0.1,<span class="string">'A'</span>,1,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs)) + ...
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95 ao(plist(<span class="string">'waveform'</span>,<span class="string">'noise'</span>,<span class="string">'type'</span>,<span class="string">'normal'</span>,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs));
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96 x.setYunits(<span class="string">'m'</span>);
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97 y = ao(plist(<span class="string">'waveform'</span>,<span class="string">'sine wave'</span>,<span class="string">'f'</span>,0.1,<span class="string">'A'</span>,2,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs,<span class="string">'phi'</span>,90)) + ...
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98 4*ao(plist(<span class="string">'waveform'</span>,<span class="string">'noise'</span>,<span class="string">'type'</span>,<span class="string">'normal'</span>,<span class="string">'nsecs'</span>,nsecs,<span class="string">'fs'</span>,fs));
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99 y.setYunits(<span class="string">'V'</span>);
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100
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101 <span class="comment">% Compute transfer function</span>
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102 Txy = ltfe(x,y,plist(<span class="string">'win'</span>,specwin(<span class="string">'Kaiser'</span>,1,200),<span class="string">'nfft'</span>,nfft));
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103
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104 <span class="comment">% Plot</span>
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105 iplot(Txy);
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106 </pre>
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107 </div>
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108
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109 <img src="images/l_transfer_1.png" alt="" border="3">
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110 <br>
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111 <!-- <img src="images/l_transfer_2.png" alt="" border="3">
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112 <br> -->
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113
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114 <h2><a name="references">References</a></h2>
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115
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116 <ol>
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117 <li> M. Troebs, G. Heinzel, Improved spectrum estimation from digitized time series
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118 on a logarithmic frequency axis, <a href="http://dx.doi.org/10.1016/j.measurement.2005.10.010" ><i>Measurement</i>, Vol. 39 (2006), pp. 120 - 129</a>. See also the <a href="http://dx.doi.org/10.1016/j.measurement.2008.04.004" >Corrigendum</a>. </li>
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119 </ol>