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Fix. Default password should be [] not an empty string
author Daniele Nicolodi <nicolodi@science.unitn.it>
date Wed, 07 Dec 2011 17:29:47 +0100
parents 409a22968d5e
children
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1 % UTP_AO_MCMC a set of UTPs for the ao/mcmc method
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2 %
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3 % M Nofrarias 06-07-09
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4 %
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5 % $Id: utp_ao_mcmc.m,v 1.8 2011/11/16 15:21:13 nikos Exp $
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6 %
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7
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8 % <MethodDescription>
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9 %
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10 % MCMC samples a probability distribution for a using a
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11 % Metropolis algorithm.
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12 %
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13 % </MethodDescription>
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14
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15 function results = utp_ao_mcmc(varargin)
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16
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17 % Check the inputs
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18 if nargin == 0
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19
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20 % Some keywords
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21 class = 'ao';
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22 mthd = 'mcmc';
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23
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24 results = [];
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25 disp('******************************************************');
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26 disp(['**** Running UTPs for ' class '/' mthd]);
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27 disp('******************************************************');
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28
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29 % Test AOs
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30 n1 = ao(plist('waveform','noise','type','normal','sigma',0.1,'nsecs',100,'fs',1,'yunits','m'));
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31 n2 = ao(plist('waveform','noise','type','normal','sigma',0.1,'nsecs',100,'fs',1,'yunits','m'));
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32 noise = [n1 ; n2];
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33
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34 in(1) = ao(plist('fs', 1, 'nsecs', 100, 'tsfcn', 'sin(2*pi*1*t)'));
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35 in(2) = ao(plist('fs', 1, 'nsecs', 100, 'tsfcn', 'sin(2*pi*0.1*t)'));
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36
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37 out(1) = ao(plist('fs', 1, 'nsecs', 100, 'tsfcn', '10 + sin(2*pi*1*t)'));
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38 out(2) = ao(plist('fs', 1, 'nsecs', 100, 'tsfcn', '200 + sin(2*pi*0.1*t)'));
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39
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40 % Test smodels
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41 st1 = smodel('a + t');
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42 st1.setXvar('f');
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43 st1.setParams('a',10);
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44 st1.setXvar('t');
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45 st1.setXvals(in(1).x);
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46
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47 st2 = smodel('b + t');
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48 st2.setXvar('f');
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49 st2.setParams('b',10);
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50 st2.setXvar('t');
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51 st2.setXvals(in(1).x);
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52
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53 model = matrix(st1,st2,st1,st2,plist('shape',[2 2]));
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54
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55 % define plist
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56 pl = plist('Fitparams',{'a','b'},...
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57 'cov',[1 0; 0 1],...
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58 'J',1,...
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59 'N',2,...
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60 'range',{[5 15],[180 220]},...
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61 'x0',[10 200], ...
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62 'noise',noise, ...
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63 'Tc',[10 20], ...
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64 'model',model, ...
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65 'search', false, ...
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66 'frequencies',[1e-3 1],...
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67 'input', [in(1) ; in(2)],...
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68 'Navs',5,...
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69 'simplex', false);
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70
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71 % Exception list for the UTPs:
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72 [ple1,ple2,ple3,ple4,ple5,ple6] = get_test_ples();
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73
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74 % Run the tests
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75 results = [results utp_01]; % getInfo call
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76 results = [results utp_02]; % Vector input
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77 results = [results utp_03]; % Matrix input
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78 results = [results utp_04]; % Test history is working
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79 results = [results utp_05]; % Test output of the data
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80
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81 %
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82 disp('Done.');
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83 disp('******************************************************');
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84
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85 elseif nargin == 1 % Check for UTP functions
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86 if strcmp(varargin{1}, 'isutp')
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87 results = 1;
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88 else
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89 results = 0;
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90 end
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91 else
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92 error('### Incorrect inputs')
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93 end
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94
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95 %% UTP_01
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96
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97 % <TestDescription>
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98 %
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99 % Tests that the getInfo call works for this method.
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100 %
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101 % </TestDescription>
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102 function result = utp_01
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103
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104 % <SyntaxDescription>
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105 %
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106 % Test that the getInfo call works for no sets, all sets, and each set
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107 % individually.
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108 %
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109 % </SyntaxDescription>
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110
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111 % <SyntaxCode>
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112 try
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113 % Call for no sets
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114 io(1) = eval([class '.getInfo(''' mthd ''', ''None'')']);
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115 % Call for all sets
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116 io(2) = eval([class '.getInfo(''' mthd ''')']);
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117 % Call for each set
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118 for kk=1:numel(io(2).sets)
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119 io(kk+2) = eval([class '.getInfo(''' mthd ''', ''' io(2).sets{kk} ''')']);
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120 end
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121 stest = true;
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122 catch err
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123 disp(err.message)
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124 stest = false;
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125 end
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126 % </SyntaxCode>
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127
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128 % <AlgoDescription>
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129 %
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130 % 1) Check that getInfo call returned an minfo object in all cases.
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131 % 2) Check that all plists have the correct parameters.
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132 %
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133 % </AlgoDescription>
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134
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135 % <AlgoCode>
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136 atest = true;
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137 if stest
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138 % check we have minfo objects
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139 if isa(io, 'minfo')
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140 % SET 'None'
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141 if ~isempty(io(1).sets), atest = false; end
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142 if ~isempty(io(1).plists), atest = false; end
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143 % Check all Sets
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144 if ~any(strcmpi(io(2).sets, 'Default')), atest = false; end
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145 if numel(io(2).plists) ~= numel(io(2).sets), atest = false; end
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146 % SET 'Default'
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147 if io(3).plists.nparams ~= 19, atest = false; end
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148 % Check key
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149 if ~io(3).plists.isparam('N'), atest = false; end
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150 if ~io(3).plists.isparam('cov'), atest = false; end
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151 if ~io(3).plists.isparam('Fitparams'), atest = false; end
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152 if ~io(3).plists.isparam('noise'), atest = false; end
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153 if ~io(3).plists.isparam('model'), atest = false; end
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154 if ~io(3).plists.isparam('search'), atest = false; end
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155 if ~io(3).plists.isparam('simplex'), atest = false; end
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156 if ~io(3).plists.isparam('heat'), atest = false; end
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157 if ~io(3).plists.isparam('Tc'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
158 if ~io(3).plists.isparam('x0'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
159 if ~io(3).plists.isparam('jumps'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
160 if ~io(3).plists.isparam('plot'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
161 if ~io(3).plists.isparam('debug'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
162 %if ~io(3).plists.isparam('fpars'), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
163 % Check default value
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
164 if ~isequal(io(3).plists.find('N'), 1000), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
165 if ~isequal(io(3).plists.find('cov'), 1e-4), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
166 if ~isEmptyDouble(io(3).plists.find('Fitparams')), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
167 if ~isequal(io(3).plists.find('noise'), ''), atest = false; end
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
168 if ~isequal(io(3).plists.find('model'), ''), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
169 if ~isequal(io(3).plists.find('search'), true), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
170 if ~isequal(io(3).plists.find('simplex'), true), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
171 if ~isequal(io(3).plists.find('heat'), 1), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
172 if ~isequal(io(3).plists.find('Tc'), []), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
173 if ~isequal(io(3).plists.find('x0'), []), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
174 if ~isequal(io(3).plists.find('jumps'), []), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
175 if ~isequal(io(3).plists.find('plot'), []), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
176 if ~isequal(io(3).plists.find('debug'), false), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
177 %if ~isequal(io(3).plists.find('fpars'), []), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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178 % Check options
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
179 if ~isequal(io(3).plists.getOptionsForParam('N'), {[1000]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
180 if ~isequal(io(3).plists.getOptionsForParam('cov'), {[1e-4]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
181 if ~isequal(io(3).plists.getOptionsForParam('Fitparams'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
182 if ~isequal(io(3).plists.getOptionsForParam('noise'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
183 if ~isequal(io(3).plists.getOptionsForParam('model'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
184 if ~isequal(io(3).plists.getOptionsForParam('search'), {true, false}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
185 if ~isequal(io(3).plists.getOptionsForParam('simplex'), {true, false}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
186 if ~isequal(io(3).plists.getOptionsForParam('heat'), {[1]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
187 if ~isequal(io(3).plists.getOptionsForParam('Tc'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
188 if ~isequal(io(3).plists.getOptionsForParam('x0'), {[]}), atest = false; end
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
189 if ~isequal(io(3).plists.getOptionsForParam('jumps'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
190 if ~isequal(io(3).plists.getOptionsForParam('plot'), {[]}), atest = false; end
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
191 if ~isequal(io(3).plists.getOptionsForParam('debug'), {false, true}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
192 %if ~isequal(io(3).plists.getOptionsForParam('fpars'), {[]}), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
193 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
194 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
195 atest = false;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
196 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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197 % </AlgoCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
198
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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199 % Return a result structure
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
200 result = utp_prepare_result(atest, stest, dbstack, mfilename);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
201 end % END UTP_01
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
202
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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203 %% UTP_02
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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204
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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205 % <TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
206 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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207 % Tests that the metropolis2D method works with a vector of AOs as input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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208 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
209 % </TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
210 function result = utp_02
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
211
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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212 % <SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
213 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
214 % Test that the metropolis2D method works for a vector of AOs as input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
215 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
216 % </SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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217
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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218 % <SyntaxCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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219 try
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
220 avec = [out(1) ; out(2)];
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
221 m = mcmc(avec,pl);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
222 stest = true;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
223 catch err
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
224 disp(err.message)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
225 stest = false;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
226 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
227 % </SyntaxCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
228
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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229 % <AlgoDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
230 %
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
231 % 1) Check that the number of elements in 'out' is the square of the
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
232 % number in the input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
233 % 2) Check that each output AO contains the correct data.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
234 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
235 % </AlgoDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
236
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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237 % <AlgoCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
238 atest = true;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
239 if stest
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
240 % Check we have the correct number of outputs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
241 if numel(m.names) ~= numel(in), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
242 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
243 atest = false;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
244 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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245 % </AlgoCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
246
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
247 % Return a result structure
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
248 result = utp_prepare_result(atest, stest, dbstack, mfilename);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
249 end % END UTP_02
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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250
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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251 %% UTP_03
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
252
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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253 % <TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
254 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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255 % Tests that the metropolis2D method works with a matrix of AOs as input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
256 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
257 % </TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
258 function result = utp_03
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
259
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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260 % <SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
261 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
262 % Test that the metropolis2D method works for a matrix of AOs as input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
263 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
264 % </SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
265
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
266 % <SyntaxCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
267 try
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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268 amat = matrix(out(1),out(2),plist('shape',[2 1]));
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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269 m = mcmc(amat,pl);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
270 stest = true;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
271 catch err
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
272 disp(err.message)
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
273 stest = false;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
274 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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275 % </SyntaxCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
276
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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277 % <AlgoDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
278 %
409a22968d5e Add unit tests
Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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279 % 1) Check that the number of elements in 'out' is the square of the
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
280 % number in the input.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
281 % 2) Check that each output AO contains the correct data.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
282 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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283 % </AlgoDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
284
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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285 % <AlgoCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
286 atest = true;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
287 if stest
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
288 % Check we have the correct number of outputs
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
289 if numel(m.names) ~= numel(in), atest = false; end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
290 else
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
291 atest = false;
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
292 end
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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293 % </AlgoCode>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
294
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Daniele Nicolodi <nicolodi@science.unitn.it>
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295 % Return a result structure
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
296 result = utp_prepare_result(atest, stest, dbstack, mfilename);
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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297 end % END UTP_03
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parents:
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298
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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299
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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300 %% UTP_04
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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301 % <TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
302 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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303 % Tests that the metropolis2D method properly applies history.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
304 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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305 % </TestDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
306 function result = utp_04
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
307
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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308 % <SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
309 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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310 % Test that the result of applying the metropolis2D method can be processed back
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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311 % to an m-file.
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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312 %
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Daniele Nicolodi <nicolodi@science.unitn.it>
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313 % </SyntaxDescription>
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
diff changeset
314
409a22968d5e Add unit tests
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315 % <SyntaxCode>
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316 try
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317 m = mcmc([out(1) ; out(2)],pl);
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318 mm = rebuild(m);
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319 stest = true;
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320 catch err
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321 disp(err.message)
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322 stest = false;
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323 end
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324 % </SyntaxCode>
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325
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326 % <AlgoDescription>
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327 %
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328 % 1) Check that the last entry in the history of 'm' corresponds to
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329 % 'metropolis2D'.
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330 % 2) Check that the re-built object is the same object as 'm'.
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331 % THIS IS NOT TRUE FOR METROPOLIS BECAUSE THE OUTPUT CHAIN IS ONLY
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332 % EQUAL STATISTICALLY
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333 %
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334 % </AlgoDescription>
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335
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336 % <AlgoCode>
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337 atest = true;
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338 if stest
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339 % Check the last step in the history of 'out'
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340 if ~strcmp(m(1).hist.methodInfo.mname, 'mcmc'), atest = true; end
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341 % Check the re-built object
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342 % if ~eq(mm(1), m(1), ple2), atest = false; end
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343 else
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344 atest = false;
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345 end
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346 % </AlgoCode>
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347
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348 % Return a result structure
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349 result = utp_prepare_result(atest, stest, dbstack, mfilename);
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350 end % END UTP_04
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351
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352 %% UTP_05
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353
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354 % <TestDescription>
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355 %
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356 % Tests that the metropolis2D method can not modify the input AO.
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357 %
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358 % </TestDescription>
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359 function result = utp_05
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360
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361 % <SyntaxDescription>
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362 %
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363 % Test that the tfe method can not modify the input AO.
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364 % The method must throw an error for the modifier call.
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365 %
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366 % </SyntaxDescription>
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367
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368 try
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369 % <SyntaxCode>
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370 % copy at1 to work with
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371 ain = ao(in(1));
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372 % modify ain
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373 ain.mcmc(in,out,pl);
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374 % </SyntaxCode>
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375 stest = false;
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376 catch err
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377 stest = true;
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378 end
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379
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380 % <AlgoDescription>
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381 %
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382 % 1) Nothing to check.
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383 %
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384 % </AlgoDescription>
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385
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386 atest = true;
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387 if stest
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388 % <AlgoCode>
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389 % </AlgoCode>
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390 else
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391 atest = false;
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392 end
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393
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394 % Return a result structure
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395 result = utp_prepare_result(atest, stest, dbstack, mfilename);
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396 end % END UTP_05
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397
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Daniele Nicolodi <nicolodi@science.unitn.it>
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398
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Daniele Nicolodi <nicolodi@science.unitn.it>
parents:
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399
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Daniele Nicolodi <nicolodi@science.unitn.it>
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400 end
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401