Mercurial > hg > ltpda
diff testing/utp_1.1/utps/ao/utp_ao_sDomainFit.m @ 44:409a22968d5e default
Add unit tests
author | Daniele Nicolodi <nicolodi@science.unitn.it> |
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date | Tue, 06 Dec 2011 18:42:11 +0100 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/testing/utp_1.1/utps/ao/utp_ao_sDomainFit.m Tue Dec 06 18:42:11 2011 +0100 @@ -0,0 +1,768 @@ +% UTP_AO_SDOMAINFIT a set of UTPs for the ao/sDomainFit method +% +% L Ferraioli 16-02-09 +% +% $Id: utp_ao_sDomainFit.m,v 1.11 2011/04/14 12:59:36 luigi Exp $ +% + +% <MethodDescription> +% +% The sDomainFit method of the ao class fit a model (parfrac object) to +% fsdata. +% +% </MethodDescription> + +function results = utp_ao_sDomainFit(varargin) + + % Check the inputs + if nargin == 0 + + % Some keywords + class = 'ao'; + mthd = 'sDomainFit'; + + results = []; + disp('******************************************************'); + disp(['**** Running UTPs for ' class '/' mthd]); + disp('******************************************************'); + + % Test AOs +% [at1,at2,at3,at4,at5,at6,atvec,atmat] = get_test_objects_ao; + + % Exception list for the UTPs: + [ple1,ple2,ple3,ple4,ple5,ple6] = get_test_ples(); + + % ---- Building fsdata test objects + + pl_data1 = plist('fsfcn', '0.01./(0.01+f)', 'f1', 1e-6, 'f2', 5, 'nf', 100); + a1 = ao(pl_data1); + + pl_data2 = plist('fsfcn', '0.001./(0.1+f)', 'f1', 1e-6, 'f2', 5, 'nf', 100); + a2 = ao(pl_data2); + + pl_data3 = plist('fsfcn', '(1e-3./(f).^2 + 1e3./(0.001+f)).*1e-9', 'f1', 1e-6, 'f2', 5, 'nf', 100); + a3 = ao(pl_data3); + + pl_data4 = plist('fsfcn', '(1e-4./(f).^2 + 1e3./(0.01+f)).*1e-10', 'f1', 1e-6, 'f2', 5, 'nf', 100); + a4 = ao(pl_data4); + + pl_data5 = plist('fsfcn', '(1e5.*f.^2 + 1e3./(0.01+f)).*1e-8', 'f1', 1e-6, 'f2', 5, 'nf', 100); + a5 = ao(pl_data5); + + a1.setName; + a2.setName; + a3.setName; + a4.setName; + a5.setName; + + av = [a1 a2 a3]; + am = [a1 a2; a3 a4]; + + % ----- Building a simple test model + f = logspace(-6,log10(5),30); + res = [0.7 0.2+0.01i 0.2-0.01i]; + poles = [0.5 0.1+0.07i 0.1-0.07i]; + tmod = parfrac(plist('res',res,'poles',poles,'dir',0,'name','test model')); + rtmod = resp(tmod,plist('f',f.')); + + % ----- Buildin a standard plist + tol = 0.5; + plstd = plist('AutoSearch','on',... + 'StartPoles',[],... + 'StartPolesOpt','clog',... + 'maxiter',60,... + 'minorder',3,... + 'maxorder',45,... + 'weights',[],... + 'weightparam','abs',... + 'CONDTYPE','MSE',... + 'FITTOL',1e-3,... + 'MSEVARTOL',1e-2,... + 'Plot','off',... + 'ForceStability','off',... + 'CheckProgress','off',... + 'direct term','off'); + + % Run the tests + results = [results utp_01]; % getInfo call + results = [results utp_02]; % Vector input + results = [results utp_03]; % Matrix input + results = [results utp_04]; % List input + results = [results utp_05]; % Test with mixed input + results = [results utp_06]; % Test history is working + results = [results utp_07]; % Test the modify call does not work + +% results = [results utp_08]; % Test input data shape == output data +% shape - this does not work because of the output properties of the +% function + + results = [results utp_09]; % Test output of the data + results = [results utp_10]; % Test the fit give the correct coefficients + + disp('Done.'); + disp('******************************************************'); + + elseif nargin == 1 % Check for UTP functions + if strcmp(varargin{1}, 'isutp') + results = 1; + else + results = 0; + end + else + error('### Incorrect inputs') + end + + %% UTP_01 + + % <TestDescription> + % + % Tests that the getInfo call works for this method. + % + % </TestDescription> + function result = utp_01 + + + % <SyntaxDescription> + % + % Test that the getInfo call works for no sets, all sets, and each set + % individually. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + % Call for no sets + io(1) = eval([class '.getInfo(''' mthd ''', ''None'')']); + % Call for all sets + io(2) = eval([class '.getInfo(''' mthd ''')']); + % Call for each set + for kk=1:numel(io(2).sets) + io(kk+2) = eval([class '.getInfo(''' mthd ''', ''' io(2).sets{kk} ''')']); + end + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that getInfo call returned an minfo object in all cases. + % 2) Check that all plists have the correct parameters. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % check we have minfo objects + if isa(io, 'minfo') + %%% SET 'None' + if ~isempty(io(1).sets), atest = false; end + if ~isempty(io(1).plists), atest = false; end + %%% Check all Sets + if ~any(strcmpi(io(2).sets, 'Default')), atest = false; end + if numel(io(2).plists) ~= numel(io(2).sets), atest = false; end + %%%%%%%%%% SET 'Default' + if io(3).plists.nparams ~= 16, atest = false; end + % Check key + if ~io(3).plists.isparam('autosearch'), atest = false; end + if ~io(3).plists.isparam('startpoles'), atest = false; end + if ~io(3).plists.isparam('startpolesopt'), atest = false; end + if ~io(3).plists.isparam('maxiter'), atest = false; end + if ~io(3).plists.isparam('minorder'), atest = false; end + if ~io(3).plists.isparam('maxorder'), atest = false; end + if ~io(3).plists.isparam('weights'), atest = false; end + if ~io(3).plists.isparam('weightparam'), atest = false; end + if ~io(3).plists.isparam('condtype'), atest = false; end + if ~io(3).plists.isparam('fittol'), atest = false; end + if ~io(3).plists.isparam('msevartol'), atest = false; end + if ~io(3).plists.isparam('plot'), atest = false; end + if ~io(3).plists.isparam('forcestability'), atest = false; end + if ~io(3).plists.isparam('direct term'), atest = false; end + if ~io(3).plists.isparam('checkprogress'), atest = false; end + if ~io(3).plists.isparam('delay'), atest = false; end + % Check default value + if ~isequal(io(3).plists.find('autosearch'), 'on'), atest = false; end + if ~isEmptyDouble(io(3).plists.find('startpoles')), atest = false; end + if ~isequal(io(3).plists.find('startpolesopt'), 'clog'), atest = false; end + if ~isequal(io(3).plists.find('maxiter'), 50), atest = false; end + if ~isequal(io(3).plists.find('minorder'), 2), atest = false; end + if ~isequal(io(3).plists.find('maxorder'), 20), atest = false; end + if ~isEmptyDouble(io(3).plists.find('weights')), atest = false; end + if ~isequal(io(3).plists.find('weightparam'), 'abs'), atest = false; end + if ~isequal(io(3).plists.find('condtype'), 'MSE'), atest = false; end + if ~isequal(io(3).plists.find('fittol'), .001), atest = false; end + if ~isequal(io(3).plists.find('msevartol'), .01), atest = false; end + if ~isequal(io(3).plists.find('plot'), 'off'), atest = false; end + if ~isequal(io(3).plists.find('forcestability'), 'off'), atest = false; end + if ~isequal(io(3).plists.find('direct term'), 'off'), atest = false; end + if ~isequal(io(3).plists.find('checkprogress'), 'off'), atest = false; end + if ~isEmptyDouble(io(3).plists.find('delay')), atest = false; end + % Check options + if ~isequal(io(3).plists.getOptionsForParam('autosearch'), {'on', 'off'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('startpoles'), {[]}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('startpolesopt'), {'real', 'clog', 'clin'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('maxiter'), {50}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('minorder'), {2}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('maxorder'), {20}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('weights'), {[]}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('weightparam'), {'ones', 'abs', 'sqrt'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('condtype'), {'MSE', 'RLD', 'RSF'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('fittol'), {.001}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('msevartol'), {.01}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('plot'), {'on', 'off'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('forcestability'), {'on', 'off'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('direct term'), {'on', 'off'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('checkprogress'), {'on', 'off'}), atest = false; end + if ~isequal(io(3).plists.getOptionsForParam('delay'), {[]}), atest = false; end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_01 + + %% UTP_02 + + % <TestDescription> + % + % Tests that the sDomainFit method works with a vector of AOs as input. + % + % </TestDescription> + function result = utp_02 + + % <SyntaxDescription> + % + % Test that the sDomainFit method works for a vector of AOs as input. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + + out = sDomainFit(av, plstd); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the number of elements in 'out' is the same as in 'av' + % 2) Check that each output AO contains the correct data. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % Check we have the correct number of outputs + if ~isequal(numel(out.objs), numel(av)), atest = false; end + % Check each output against the absolute value of the input + for kk=1:numel(out.objs) + % Check the fitted ao(fsdata) objects + if isa(av(kk).data, 'fsdata') + % check that the output data responses are accurate to the + % prescribed accuracy + mse = out.objs(kk).procinfo.find('FIT_MSE'); + if mse(end)>tol, atest = false; end + else + % Check the other objects (they must be empty) + if ~isempty([out.objs(kk).filters.a]), atest = false; end + if ~isempty([out.objs(kk).filters.b]), atest = false; end + end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_02 + + %% UTP_03 + + % <TestDescription> + % + % Tests that the sDomainFit method works with a matrix of AOs as input. + % + % </TestDescription> + function result = utp_03 + + % <SyntaxDescription> + % + % Test that the sDomainFit method works for a matrix of AOs as input. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + out = sDomainFit(am, plstd); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the number of elements in 'out' is the same as in 'am' + % 2) Check that each output AO contains the correct data. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % Check we have the correct number of outputs + if ~isequal(numel(out.objs), numel(am)), atest = false; end + % Check each output against the absolute value of the input + for kk=1:numel(out.objs) + % Check the fitted ao(fsdata) objects + if isa(am(kk).data, 'fsdata') + % check that the output data responses are accurate to the + % prescribed accuracy + mse = out.objs(kk).procinfo.find('FIT_MSE'); + if mse(end)>tol, atest = false; end + else + % Check the other objects (they must be empty) + if ~isempty([out.objs(kk).filters.a]), atest = false; end + if ~isempty([out.objs(kk).filters.b]), atest = false; end + end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_03 + + %% UTP_04 + + % <TestDescription> + % + % Tests that the sDomainFit method works with a list of AOs as input. + % + % </TestDescription> + function result = utp_04 + + % <SyntaxDescription> + % + % Test that the sDomainFit method works for a list of AOs as input. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + out = sDomainFit(a1,a2,a3, plstd); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the number of elements in 'out' is the same as in + % input. + % 2) Check that each output AO contains the correct data. + % + % </AlgoDescription> + + atest = true; + aoin = [a1,a2,a3]; + if stest + % <AlgoCode> + % Check we have the correct number of outputs + if ~isequal(numel(out.objs), numel(aoin)), atest = false; end + % Check each output against the absolute value of the input + for kk=1:numel(out.objs) + % Check the fitted ao(fsdata) objects + if isa(aoin(kk).data, 'fsdata') + % check that the output data responses are accurate to the + % prescribed accuracy + mse = out.objs(kk).procinfo.find('FIT_MSE'); + if mse(end)>tol, atest = false; end + else + % Check the other objects (they must be empty) + if ~isempty([out.objs(kk).filters.a]), atest = false; end + if ~isempty([out.objs(kk).filters.b]), atest = false; end + end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_04 + + %% UTP_05 + + % <TestDescription> + % + % Tests that the sDomainFit method works with a mix of different shaped AOs as + % input. + % + % </TestDescription> + function result = utp_05 + + % <SyntaxDescription> + % + % Test that the sDomainFit method works with an input of matrices and vectors + % and single AOs. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + out = sDomainFit(a5,[a1 a2;a3 a4],plstd); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the number of elements in 'out' is the same as in + % input. + % 2) Check that each output AO contains the correct data. + % + % </AlgoDescription> + + atest = true; + aoin = [a5,reshape([a1 a2;a3 a4],1,[])]; + if stest + % <AlgoCode> + % Check we have the correct number of outputs + if ~isequal(numel(out.objs), numel(aoin)), atest = false; end + % Check each output against the absolute value of the input + for kk=1:numel(out.objs) + % Check the fitted ao(fsdata) objects + if isa(aoin(kk).data, 'fsdata') + % check that the output data responses are accurate to the + % prescribed accuracy + mse = out.objs(kk).procinfo.find('FIT_MSE'); + if mse(end)>tol, atest = false; end + else + % Check the other objects (they must be empty) + if ~isempty([out.objs(kk).filters.a]), atest = false; end + if ~isempty([out.objs(kk).filters.b]), atest = false; end + end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_05 + + %% UTP_06 + + % <TestDescription> + % + % Tests that the sDomainFit method properly applies history. + % + % </TestDescription> + function result = utp_06 + + % <SyntaxDescription> + % + % Test that the result of applying the sDomainFit method can be processed back. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + out = sDomainFit(a1,plstd); + mout = rebuild(out); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the last entry in the history of 'out' corresponds to + % 'sDomainFit'. + % 2) Check that the re-built object is the same object as the input. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % Check the last step in the history of 'out' + if ~strcmp(out(1).hist.methodInfo.mname, 'sDomainFit'), atest = false; end + % Check the re-built object + if ~eq(mout, out, ple2), atest = false; end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_06 + + %% UTP_07 + + % <TestDescription> + % + % sDomainFit cannot modify the input AO. + % + % </TestDescription> + function result = utp_07 + + % <SyntaxDescription> + % + % Test that the sDomainFit method can modify the input AO by calling with no + % output and that the method doesn't change the input of the function + % notation (with a equal sign). + % + % </SyntaxDescription> + + try + % <SyntaxCode> + % copy a3 to work with + amodi = ao(a3); + aeq = ao(a3); + amodi.sDomainFit(plstd); + out = aeq.sDomainFit(plstd); + % </SyntaxCode> + stest = false; + catch err + disp(err.message) + stest = true; + end + + % <AlgoDescription> + % + % 1) Nothing to do. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_07 + +% %% UTP_08 +% +% % <TestDescription> +% % +% % Test the shape of the output. - Does not make sense for sDomainFit +% % becauses the output are miir filters +% % +% % </TestDescription> +% function result = utp_08 +% +% % <SyntaxDescription> +% % +% % Test that the sDomainFit method keeps the data shape of the input object. The +% % input AO must be an AO with row data and an AO with column data. +% % +% % </SyntaxDescription> +% +% try +% % <SyntaxCode> +% out1 = sDomainFit(a2,plstd); +% out2 = sDomainFit(a1,plstd); +% % </SyntaxCode> +% stest = true; +% catch err +% disp(err.message) +% stest = false; +% end +% +% % <AlgoDescription> +% % +% % 1) Check that the shape of the data doesn't change. +% % +% % </AlgoDescription> +% +% atest = true; +% if stest +% % <AlgoCode> +% % Check the shape of the output data +% if size(out1.data.x) ~= size(at5.data.x), atest = false; end +% if size(out1.data.y) ~= size(at5.data.y), atest = false; end +% if size(out2.data.x) ~= size(at6.data.x), atest = false; end +% if size(out2.data.y) ~= size(at6.data.y), atest = false; end +% % </AlgoCode> +% else +% atest = false; +% end +% +% % Return a result structure +% result = utp_prepare_result(atest, stest, dbstack, mfilename); +% end % END UTP_08 + + %% UTP_09 + + % <TestDescription> + % + % Check that the sDomainFit method pass back the output objects to a + % single variable correctly. + % + % </TestDescription> + function result = utp_09 + + % <SyntaxDescription> + % + % Call the method with a list of output variables and with a single output + % variable. Additionaly check that the rebuild method works on the output. + % + % </SyntaxDescription> + + try + % <SyntaxCode> +% [o1, o2] = sDomainFit(a1, a2, plstd); + o3 = sDomainFit(a1, a2, plstd); +% mout1 = rebuild(o1); +% mout2 = rebuild(o2); + mout3 = rebuild(o3); +% o31 = o3.index(1); +% o32 = o3.index(2); +% mout31 = rebuild(o31); +% mout32 = rebuild(o32); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the output contains the right number of objects + % 2) Check that the 'rebuild' method produces the same object as 'out'. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % Check the number of outputs +% if numel(o1) ~=1, atest = false; end +% if numel(o2) ~=1, atest = false; end +% if numel(o3) ~=2, atest = false; end + % Check the rebuilding of the object +% if ~eq(o1, mout1, ple2), atest = false; end +% if ~eq(o2, mout2, ple2), atest = false; end +% if ~eq(o3(1), mout3(1), ple2), atest = false; end +% if ~eq(o3(2), mout3(2), ple2), atest = false; end +% if ~eq(o31, mout31, ple2), atest = false; end +% if ~eq(o32, mout32, ple2), atest = false; end + if ~eq(o3, mout3, ple4), atest = false; end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_09 + + %% UTP_10 + + % <TestDescription> + % + % Tests that the sDomainFit method return the correct coefficients + % + % </TestDescription> + function result = utp_10 + + % <SyntaxDescription> + % + % Test that the sDomainFit method works with an input of matrices and vectors + % and single AOs. + % + % </SyntaxDescription> + + try + % <SyntaxCode> + tol = 0.5; + plstd2 = plist('AutoSearch','off',... + 'StartPoles',[],... + 'StartPolesOpt','clog',... + 'maxiter',60,... + 'minorder',3,... + 'maxorder',3,... + 'weights',[],... + 'weightparam','abs',... + 'CONDTYPE','MSE',... + 'FITTOL',1e-3,... + 'MSEVARTOL',1e-2,... + 'Plot','off',... + 'ForceStability','off',... + 'CheckProgress','off',... + 'direct term','off'); + out = sDomainFit(rtmod,plstd2); + % </SyntaxCode> + stest = true; + catch err + disp(err.message) + stest = false; + end + + % <AlgoDescription> + % + % 1) Check that the number of elements in 'out' is the same as in + % input. + % 2) Check that output contains the correct coefficients. + % + % </AlgoDescription> + + atest = true; + if stest + % <AlgoCode> + % Check we have the correct number of outputs + if ~isequal(numel(out), numel(rtmod)), atest = false; end + % Check the fitted ao(fsdata) objects + if isa(rtmod.data, 'fsdata') + % check that fit coefficients corresponds to real coefficients + % within a tolerance + if any(abs(tmod.res - out.res)>1e-4), atest = false; end + if any(abs(tmod.poles - out.poles)>1e-4), atest = false; end + else + % Check the other objects (they must be empty) + if ~isempty(out.res), atest = false; end + if ~isempty(out.poles), atest = false; end + end + % </AlgoCode> + else + atest = false; + end + + % Return a result structure + result = utp_prepare_result(atest, stest, dbstack, mfilename); + end % END UTP_10 + +end