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view src/ltpda_smoother/ltpda_smoother.c @ 29:54f14716c721 database-connection-manager
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author | Daniele Nicolodi <nicolodi@science.unitn.it> |
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date | Mon, 05 Dec 2011 16:20:06 +0100 |
parents | f0afece42f48 |
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#include <math.h> #include <stdio.h> #include <stdlib.h> #include <string.h> #include <mex.h> #include "version.h" #include "ltpda_smoother.h" #include "quick.c" #define DEBUG 0 /* * A smoother function that uses various methods to smooth data. * * M Hewitson 28-08-01 * * $Id: ltpda_smoother.c,v 1.4 2008/09/25 08:16:16 hewitson Exp $ */ /* function sy = ltpda_smoother(y, bw, ol, method); */ void mexFunction(int nlhs, mxArray *plhs[], int nrhs, const mxArray *prhs[]) { int status; int buff_len; /* outputs */ double *outputPtr; double *nxx; int a; /* inputs */ double *xx; int bw; double ol; int nx; char *method; /* parse input functions */ if( (nrhs == 0) || (nlhs == 0) ) { print_usage(VERSION); } if( (nrhs == 4) && (nlhs == 1) )/* let's go */ { /*----------------- set inputs*/ xx = mxGetPr(prhs[0]); bw = (int)floor(mxGetScalar(prhs[1])); ol = mxGetScalar(prhs[2]); nx = mxGetNumberOfElements(prhs[0]); /* Read the method*/ buff_len = (mxGetM(prhs[3]) * mxGetN(prhs[3])) + 1; method = mxCalloc(buff_len, sizeof(char)); status = mxGetString(prhs[3], method, buff_len); if(status != 0) mexWarnMsgTxt("Not enough space. String is truncated."); /* create output vector*/ nxx = (double*)mxCalloc(nx, sizeof(double)); /* nfest*/ smooth(nxx, xx, nx, bw, ol, method); /* output noise-floor vector*/ plhs[0] = mxCreateDoubleMatrix(1,nx,mxREAL); outputPtr = mxGetPr(plhs[0]); for(a=0; a<nx; a++) outputPtr[a] = nxx[a]; mxFree(nxx); } else { print_usage(VERSION); } } void print_usage(char *version) { mexPrintf("ltpda_smoother version %s\n", version); mexPrintf(" usage: function sy = ltpda_smoother(y, bw, ol, method); \n"); mexErrMsgTxt("### incorrect usage"); } /* * Smoother */ int smooth(double *nxx, double *xx, int nx, int bw, double ol, char *method) { int k, j, idx; int hbw; double *seg; seg = (double*)mxCalloc(bw+1, sizeof(double)); /* go through each element */ for(k=0; k<nx; k++) { /* get segment*/ for(j=0; j<=bw; j++) { idx = k+j-bw/2; if (idx<0) idx = 0; if (idx>=nx) idx = nx-1; seg[j] = xx[idx]; } /* sort segment*/ quickSort(seg, bw-1); /* stop index*/ idx = (int)floor(ol*bw); /* Which smoothing method? */ if (strcmp(method, "median")==0) { /* make median estimate of selected samples */ nxx[k] = median(seg, idx); } else if (strcmp(method, "mean")==0) { /* make mean estimate of selected samples */ nxx[k] = mean(seg, idx); } else if (strcmp(method, "min")==0) { /* make min estimate of selected samples */ nxx[k] = smin(seg, idx); } else if (strcmp(method, "max")==0) { /* make max estimate of selected samples */ nxx[k] = smax(seg, idx); } } /* Clean up */ mxFree(seg); return 0; } double smin(double *x, int nx) { double m; int j; m = x[0]; for (j=1; j<nx; j++) if (x[j] < m) m = x[j]; return m; } double smax(double *x, int nx) { double m; int j; m = x[0]; for (j=1; j<nx; j++) if (x[j] > m) m = x[j]; return m; } double mean(double *x, int nx) { int j; double sx = 0.0; for (j=0; j<nx; j++) sx += x[j]; return sx/nx; } double median(double *x, int nx) { double m; if (nx%2 == 0) /* even*/ m = (x[nx/2] + x[nx/2 -1])/2.0; else m = x[(nx-1)/2]; return m; }