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Fix. Default password should be [] not an empty string
author | Daniele Nicolodi <nicolodi@science.unitn.it> |
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date | Wed, 07 Dec 2011 17:29:47 +0100 |
parents | 409a22968d5e |
children |
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% UTP_AO_FIXFS a set of UTPs for the ao/fixfs method % % M Hewitson 06-08-08 % % $Id: utp_ao_fixfs.m,v 1.19 2011/08/22 05:04:49 hewitson Exp $ % % <MethodDescription> % % The fixfs method of the ao class resamples time-series AOs to have a % fixed sample rate. % % </MethodDescription> function results = utp_ao_fixfs(varargin) % Check the inputs if nargin == 0 % Some keywords class = 'ao'; mthd = 'fixfs'; results = []; disp('******************************************************'); disp(['**** Running UTPs for ' class '/' mthd]); disp('******************************************************'); % Test AOs [at1,at2,at3,at4,at5,at6,atvec,atmat] = eval(['get_test_objects_' class]); % Exception list for the UTPs: [ple1,ple2,ple3,ple4,ple5,ple6] = get_test_ples(); % Run the tests results = [results utp_01]; % getInfo call results = [results utp_02]; % Vector input results = [results utp_03]; % Matrix input results = [results utp_04]; % List input results = [results utp_05]; % Test with mixed input results = [results utp_06]; % Test history is working results = [results utp_07]; % Test the modify call works results = [results utp_08]; % Test the data shape results = [results utp_09]; % Test output of the data results = [results utp_10]; % Test multiple 'fs' for multiple input AOs results = [results utp_11(mthd, at1, ple1)]; % Test plotinfo doesn't disappear results = [results utp_12]; % Test with plist: method == 'samples' results = [results utp_13]; % Test with antialising filter results = [results utp_14]; % Test AO with non evenly sampled data disp('Done.'); disp('******************************************************'); elseif nargin == 1 % Check for UTP functions if strcmp(varargin{1}, 'isutp') results = 1; else results = 0; end else error('### Incorrect inputs') end %% UTP_01 % <TestDescription> % % Tests that the getInfo call works for this method. % % </TestDescription> function result = utp_01 % <SyntaxDescription> % % Test that the getInfo call works for no sets, all sets, and each set % individually. % % </SyntaxDescription> try % <SyntaxCode> % Call for no sets io(1) = eval([class '.getInfo(''' mthd ''', ''None'')']); % Call for all sets io(2) = eval([class '.getInfo(''' mthd ''')']); % Call for each set for kk=1:numel(io(2).sets) io(kk+2) = eval([class '.getInfo(''' mthd ''', ''' io(2).sets{kk} ''')']); end % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that getInfo call returned an minfo object in all cases. % 2) Check that all plists have the correct parameters. % % </AlgoDescription> atest = true; if stest % <AlgoCode> % check we have minfo objects if isa(io, 'minfo') %%% SET 'None' if ~isempty(io(1).sets), atest = false; end if ~isempty(io(1).plists), atest = false; end %%% Check all Sets if ~any(strcmpi(io(2).sets, 'Default')), atest = false; end if numel(io(2).plists) ~= numel(io(2).sets), atest = false; end %%%%%%%%%% SET 'Default' if io(3).plists.nparams ~= 4, atest = false; end % Check key if ~io(3).plists.isparam('fs'), atest = false; end if ~io(3).plists.isparam('method'), atest = false; end if ~io(3).plists.isparam('filter'), atest = false; end if ~io(3).plists.isparam('interpolation'), atest = false; end % Check default value if ~isequal(io(3).plists.find('fs'), -1), atest = false; end if ~strcmpi(io(3).plists.find('method'), 'time'), atest = false; end if ~isequal(io(3).plists.find('filter'), 'off'), atest = false; end if ~isequal(io(3).plists.find('interpolation'), 'spline'), atest = false; end % Check options if ~isequal(io(3).plists.getOptionsForParam('fs'), {-1}), atest = false; end if ~isequal(io(3).plists.getOptionsForParam('method'), {'time', 'samples'}), atest = false; end if ~isequal(io(3).plists.getOptionsForParam('interpolation'), {'nearest', 'linear', 'spline', 'cubic'}), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_01 %% UTP_02 % <TestDescription> % % Tests that the fixfs method works with a vector of AOs as input. % % </TestDescription> function result = utp_02 % <SyntaxDescription> % % Test that the fixfs method works for a vector of AOs as input. % % </SyntaxDescription> try % <SyntaxCode> avec = [at1 at5 at6]; out = fixfs(avec); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the number of elements in 'out' is the same as % the number in the input. % 2) Check that each output AO contains the correct data. % % </AlgoDescription> atest = true; if stest % <AlgoCode> % Check we have the correct number of outputs if numel(out) ~= numel(avec), atest = false; end % Check the output data for kk = 1:numel(avec) fs = avec(kk).fs; t0 = 0; Nsecs = avec(kk).data.nsecs; t = t0 + [0:1/fs:Nsecs-1/fs].'; y = interp1(avec(kk).x,avec(kk).y, t, 'spline', 'extrap'); if ~isequal(y, out(kk).y), atest = false; end if ~isequal(t, out(kk).x), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_02 %% UTP_03 % <TestDescription> % % Tests that the fixfs method works with a matrix of AOs as input. % % </TestDescription> function result = utp_03 % <SyntaxDescription> % % Test that the fixfs method works for a matrix of AOs as input. % % </SyntaxDescription> try % <SyntaxCode> amat = [at1 at5 at6; at5 at6 at1]; out = fixfs(amat); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the number of elements in 'out' is the same as % the number in the input. % 2) Check that each output AO contains the correct data. % % </AlgoDescription> atest = true; if stest % <AlgoCode> % Check we have the correct number of outputs if numel(out) ~= numel(amat), atest = false; end % Check the output data for kk = 1:numel(amat) fs = amat(kk).fs; t0 = 0; Nsecs = amat(kk).data.nsecs; t = t0 + [0:1/fs:Nsecs-1/fs].'; y = interp1(amat(kk).x,amat(kk).y, t, 'spline', 'extrap'); if ~isequal(y, out(kk).y), atest = false; end if ~isequal(t, out(kk).x), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_03 %% UTP_04 % <TestDescription> % % Tests that the fixfs method works with a list of AOs as input. % % </TestDescription> function result = utp_04 % <SyntaxDescription> % % Test that the fixfs method works for a list of AOs as input. % % </SyntaxDescription> try % <SyntaxCode> out = fixfs(at1,at5,at6); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the number of elements in 'out' is the same as % the number in the input. % 2) Check that each output AO contains the correct data. % % </AlgoDescription> atest = true; aoin = [at1, at5, at6]; if stest % <AlgoCode> % Check we have the correct number of outputs if numel(out) ~= 3, atest = false; end % Check the output data for kk = 1:numel(aoin) fs = aoin(kk).fs; t0 = 0; Nsecs = aoin(kk).data.nsecs; t = t0 + [0:1/fs:Nsecs-1/fs].'; y = interp1(aoin(kk).x,aoin(kk).y, t, 'spline', 'extrap'); if ~isequal(y, out(kk).y), atest = false; end if ~isequal(t, out(kk).x), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_04 %% UTP_05 % <TestDescription> % % Tests that the fixfs method works with a mix of different shaped AOs as % input. % % </TestDescription> function result = utp_05 % <SyntaxDescription> % % Test that the fixfs method works with an input of matrices and vectors % and single AOs. Additionally define a 'fs' in a plist. % % </SyntaxDescription> try % <SyntaxCode> fs = 7; pl = plist('fs', fs); out = fixfs(at1,[at5 at6],at5,[at5 at1; at6 at1],at6, pl); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the number of elements in 'out' is the same as in % input. % 2) Check that each output AO contains the correct data. % 3) Check that 't0' and 'fs' are correct. % % </AlgoDescription> TOL = 1e-14; atest = true; aoin = [at1, reshape([at5 at6], 1, []), at5, reshape([at5 at1; at6 at1], 1, []), at6]; if stest % <AlgoCode> % Check we have the correct number of outputs if numel(out) ~= 9, atest = false; end % Check the output data for kk = 1:numel(aoin) Nsecs = aoin(kk).data.nsecs; % We have to think about what we want to do with t0 t0 = aoin(kk).data.t0.double; % This is numerically more accurate t = [0:1/fs:Nsecs-1/fs].'; y = interp1(aoin(kk).x, aoin(kk).y, t, 'spline', 'extrap'); if ~isequal(y, out(kk).y), atest = false; end if any(abs(t-out(kk).x)>TOL), atest = false; end % Check 't0' and 'fs' if ~isequal(out(kk).fs, fs), atest = false; end if ~isequal(out(kk).t0.utc_epoch_milli, t0*1000), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_05 %% UTP_06 % <TestDescription> % % Tests that the fixfs method properly applies history. % % </TestDescription> function result = utp_06 % <SyntaxDescription> % % Test that the result of applying the fixfs method can be processed back % to an m-file. Additionally define a 'fs' in a plist. % % </SyntaxDescription> try % <SyntaxCode> fs = 7; pl = plist('fs', fs); out = fixfs(at5, pl); mout = rebuild(out); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the last entry in the history of 'out' corresponds to % 'fixfs'. % 2) % Check that the re-built object is the same object as 'out'. % % </AlgoDescription> TOL = 1e-14; atest = true; if stest % <AlgoCode> % Check the last step in the history of 'out' if ~strcmp(out.hist.methodInfo.mname, 'fixfs'), atest = false; end % Check the output data Nsecs = at5.data.nsecs; % We have to think about what we want to do with t0 t0 = at5.data.t0.double; % This is numerically more accurate t = [0:1/fs:Nsecs-1/fs].'; y = interp1(at5.x, at5.y, t, 'spline', 'extrap'); if ~isequal(y, out.y), atest = false; end if any(abs(t-out.x)>TOL), atest = false; end % Check 't0' and 'fs' if ~isequal(out.fs, fs), atest = false; end if ~isequal(out.t0.utc_epoch_milli, t0*1000), atest = false; end % % Check the re-built object if ~eq(mout, out, ple2), atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_06 %% UTP_07 % <TestDescription> % % Tests that the fixfs method can modify the input AO. % % </TestDescription> function result = utp_07 % <SyntaxDescription> % % Test that the fixfs method can modify the input AO by calling % with no output. % % </SyntaxDescription> try % <SyntaxCode> fs = 27; pl = plist('fs', fs); % copy at1 to work with ain = ao(at1); % modify ain aout = ain.fixfs(pl); ain.fixfs(pl); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that 'at1' and 'ain' are now different. % 2) Check that 'ain' is fixfs(at1). % % </AlgoDescription> TOL = 1e-14; atest = true; if stest % <AlgoCode> % Check that fixfs modified the input by comparing to the copy if eq(ao(at1), ain, ple1), atest = false; end % Check that fixfs doesn't modified the input for the function notation if ~eq(aout, ain, ple1), atest = false; end % Check the output data Nsecs = at1.data.nsecs; % We have to think about what we want to do with t0 t0 = at1.data.t0.double; % This is numerically more accurate t = [0:1/fs:Nsecs-1/fs].'; y = interp1(at1.x, at1.y, t, 'spline', 'extrap'); if ~isequal(y, ain.y), atest = false; end if any(abs(t-ain.x)>TOL), atest = false; end % Check 't0' and 'fs' if ~isequal(ain.fs, fs), atest = false; end if ~isequal(ain.t0.utc_epoch_milli, t0*1000), atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_07 %% UTP_08 % <TestDescription> % % Tests that the fixfs method keeps the data shape of the input object. % % </TestDescription> function result = utp_08 % <SyntaxDescription> % % Test that the fixfs method keeps the data shape of the input object. The % input AO must be an AO with row data and an AO with column data. % % </SyntaxDescription> try % <SyntaxCode> fs = 27; pl = plist('fs', fs); out1 = fixfs(at5, pl); out2 = fixfs(at6, pl); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the shpe of the data doesn't change. % % </AlgoDescription> atest = true; if stest % <AlgoCode> % Check the shape of the output data if size(out1.data.y,2) ~= 1, atest = false; end if size(out2.data.y,1) ~= 1, atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_08 %% UTP_09 % <TestDescription> % % Check that the fixfs method pass back the output objects to a list of % output variables or to a single variable. % % </TestDescription> function result = utp_09 % <SyntaxDescription> % % Call the method with a list of output variables and with a single output % variable. Additionaly check that the rebuild method works on the output. % % </SyntaxDescription> try % <SyntaxCode> fs = 27; pl = plist('fs', fs); [o1, o2] = fixfs(at5, at6, pl); o3 = fixfs(at5, at6, pl); mout1 = rebuild(o1); mout2 = rebuild(o2); mout3 = rebuild(o3); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the output contains the right number of objects % 2) Check that the 'rebuild' method produces the same object as 'out'. % % </AlgoDescription> atest = true; if stest % <AlgoCode> % Check the number of outputs if numel(o1) ~=1, atest = false; end if numel(o2) ~=1, atest = false; end if numel(o3) ~=2, atest = false; end % Check the rebuilding of the object if ~eq(o1, mout1, ple2), atest = false; end if ~eq(o2, mout2, ple2), atest = false; end if ~eq(o3, mout3, ple2), atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_09 %% UTP_10 % <TestDescription> % % Tests that the fixfs method works with a list of AOs as input and different % 't0' and 'fs' for the inputs. % % </TestDescription> function result = utp_10 % <SyntaxDescription> % % Test that the fixfs method works for a list of AOs as input and different % 't0' and 'fs' % % </SyntaxDescription> try % <SyntaxCode> fs_in = [ 3 7 9 ]; pl = plist('fs', fs_in); out = fixfs(at1,at5,at6, pl); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that the number of elements in 'out' is the same as % the number in the input. % 2) Check that each output AO contains the correct data. % 3) Check that each output contains the correct frequency and start time. % % </AlgoDescription> TOL = 1e-14; atest = true; aoin = [at1, at5, at6]; if stest % <AlgoCode> % Check we have the correct number of outputs if numel(out) ~= 3, atest = false; end % Check the output data for kk = 1:numel(aoin) fs = fs_in(kk); t0 = aoin(kk).data.t0.double; Nsecs = aoin(kk).data.nsecs; t = [0:1/fs:Nsecs-1/fs].'; y = interp1(aoin(kk).x,aoin(kk).y, t, 'spline', 'extrap'); if ~isequal(y, out(kk).y), atest = false; end if any(abs(t-out(kk).x)>TOL), atest = false; end % Check 't0' and 'fs' if abs(out(kk).fs - fs)>TOL, atest = false; end if ~isequal(out(kk).t0.utc_epoch_milli, t0*1000), atest = false; end end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_10 %% UTP_12 % <TestDescription> % % Tests that the fixfs method works with the method 'samples'. % % </TestDescription> function result = utp_12 % <SyntaxDescription> % % Test that the fixfs method works for the method 'samples'. % % </SyntaxDescription> try % <SyntaxCode> pl = plist('method', 'Samples'); out = fixfs(at1, pl); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that each output AO contains the correct data. % 2) Check that each output contains the correct frequency and start time. % % </AlgoDescription> TOL = 1e-14; atest = true; if stest % <AlgoCode> % Check the output data N = length(at1.y); t = linspace(0, (N-1)/at1.fs, N).'; y = interp1(at1.x,at1.y, t, 'spline', 'extrap'); if ~isequal(y, out.y), atest = false; end if any(abs(t-out.x)>TOL), atest = false; end % Check 'fs' if ~isequal(out.fs, 1/(t(2)-t(1))), atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_12 %% UTP_13 % <TestDescription> % % Tests that the fixfs method works with antialising filter. % % </TestDescription> function result = utp_13 % <SyntaxDescription> % % Test that the fixfs method works for the antialising filters iir and fir. % % </SyntaxDescription> try % <SyntaxCode> pl_iir = plist('filter', 'iir'); pl_fir = plist('filter', 'fir'); out_iir = fixfs(at1, pl_iir); out_fir = fixfs(at1, pl_fir); % </SyntaxCode> stest = true; catch err disp(err.message) stest = false; end % <AlgoDescription> % % 1) Check that each output AO contains the correct data. % 2) Check that each output contains the correct frequency and start time. % % </AlgoDescription> TOL = 1e-14; atest = true; if stest % <AlgoCode> % Check the output data Nsecs = at1.data.nsecs; t = [0:1/at1.fs:Nsecs-1/at1.fs].'; % Compute antialiasing filter (iir filter) pl = plist('type', 'lowpass', 'order', 8, 'fs', at1.fs,'fc', 0.9*(at1.fs/2)); f = miir(pl); at1_iir = filtfilt(at1, f); y_iir = interp1(at1_iir.x, at1_iir.y, t, 'spline', 'extrap'); % Compute antialiasing filter (fir filter) pl = plist('type', 'lowpass', 'order', 64, 'fs', at1.fs, 'fc', 0.9*(at1.fs/2)); f = mfir(pl); at1_fir = filter(at1, f); y_fir = interp1(at1_fir.x, at1_fir.y, t, 'spline', 'extrap'); % Check with iir filter if ~isequal(y_iir, out_iir.y), atest = false; end if any(abs(t-out_iir.x)>TOL), atest = false; end if ~isequal(out_iir.fs, 1/(t(2)-t(1))), atest = false; end % Check with fir filter if ~isequal(y_fir, out_fir.y), atest = false; end if any(abs(t-out_fir.x)>TOL), atest = false; end if ~isequal(out_fir.fs, 1/(t(2)-t(1))), atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename); end % END UTP_13 %% UTP_14 % <TestDescription> % % Tests that the fixfs method works with an AO with non evenly sampled data. % % </TestDescription> function result = utp_14 % <SyntaxDescription> % % Test that the fixfs method works for an AO with non evenly samples data. % % </SyntaxDescription> msg = ''; try % <SyntaxCode> xvals = sort(randn(30,1)); yvals = randn(30,1); pl_ao = plist('xvals', xvals, 'yvals', yvals, 'type', 'tsdata'); aa = ao(pl_ao); fs = 13; t0 = 7; pl = plist('t0', t0, 'fs', fs); out = fixfs(aa, pl); % </SyntaxCode> stest = true; catch err disp(err.message) msg = err.message; stest = false; end % <AlgoDescription> % % 1) Check that each output AO contains the correct data. % 2) Check that each output contains the correct frequency and start time. % % </AlgoDescription> TOL = 1e-14; atest = true; if stest % <AlgoCode> % Check the output data Nsecs = aa.data.nsecs; t0 = aa.data.getX(1); t = t0 + [0:1/fs:Nsecs-1/fs].'; y = interp1(aa.x,aa.y, t, 'spline', 'extrap'); if ~isequal(y, out.y), msg = 'y values are not equal'; atest = false; end if any(abs(t-out.x)>TOL), msg = 'x values are not evenly spaced'; atest = false; end % Check 't0' and 'fs' if abs(out.fs - fs)>TOL, msg = 'the sample rates are not correct'; atest = false; end if ~eq(out.t0, aa.t0), msg = 'the t0 is not correct'; atest = false; end % </AlgoCode> else atest = false; end % Return a result structure result = utp_prepare_result(atest, stest, dbstack, mfilename, msg); end % END UTP_14 end